KEGG   Camellia sinensis (tea plant): 114284981
Entry
114284981         CDS       T07364                                 
Name
(RefSeq) UBP1-associated protein 2A-like isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114284981
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114284981
   03041 Spliceosome [BR:csin03041]
    114284981
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114284981
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114284981
Spliceosome [BR:csin03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114284981
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8 RRM_Nup35
Other DBs
NCBI-GeneID: 114284981
NCBI-ProteinID: XP_028083750
LinkDB
Position
Unknown
AA seq 434 aa
MARKRKLVPKSTEPQLKKQQREVQQLQYYAKDEQDDDQEAMDGVVGPEEYEEDQDQQHYE
DGDDNDDEEQEPERDDDDEEPFQKLLEPFSKEQLINLLSEAAENHADVANRIYKIANSDP
SQRKIFVHGLGWDTNSETLINAFKHYGEIEDCKAVCDKISGKSKGYGFILFKTPAVPVAP
LPPAPASEYTQRKIYVSNVSADLDPQKLVSFFSKYGEIEEGPLGLDKQTGQPRGFCLFVY
RTIESAKKALMEPHKNFEGHILHCQRAIDGPKQSKSHSLHNPNLHNPQFQRNETTSFVGS
ASGPGHLMAPSGPTYNQGAAVQGLNPALGQALTALLATQGASLGLTNLLGTLGGTGVGSS
VNPTVPGASHGMQGGYGNQGVVGGSVSSGATGGYGNHQMGYQNQNQNQQIGQGGSIRSQH
GVGNMGGIRPYMGH
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggcgagaaaacgaaaactcgtgcccaaatcgaccgaaccccaactcaagaagcagcaa
agagaagtacagcaacttcaatattacgctaaagacgaacaagacgatgatcaagaagcc
atggatggagtagtaggacctgaagaatacgaagaagaccaagaccaacaacactacgaa
gacggcgacgacaacgacgacgaagaacaagaacccgaaagagacgatgacgacgaggag
cctttccagaagcttctagaaccattcagcaaagaacagttgattaatttgctctccgag
gctgccgagaatcacgccgatgtagccaatcgcatctacaagatcgccaacagtgatccc
tcccagcgcaagatcttcgtccacggcctcggatgggacaccaattccgaaaccctaatc
aacgccttcaagcactacggcgagatcgaggattgcaaggccgtttgcgacaagatctcc
ggcaaatccaagggctatggatttatcctcttcaagacccccgcggtgcccgttgctccg
cttccgccggcgccggcgtcggagtacacgcagaggaagatctacgtcagcaacgtgtcg
gctgatttggatccccaaaagctggtttcttttttttccaagtacggtgagattgaagaa
gggcctttagggctcgataagcagactgggcagcctagagggttttgtctattcgtgtac
aggacaatcgagagtgcgaagaaggcattaatggagcctcataagaactttgaagggcac
attttgcattgccagagagcaattgatggtccaaaacaaagcaaatcacattcccttcat
aaccctaatttgcataaccctcaattccagaggaatgagactactagttttgttgggtcg
gcatcgggaccggggcatttgatggcaccttctgggccaacgtacaatcagggagcagct
gtgcagggtctgaacccggctcttggacaggctttgacagcgttgcttgcgactcagggt
gcgagtttggggctgactaacttgcttggcacgcttggcggtactggagtgggtagttcg
gtgaaccccacggtgcctggtgcgagccatggaatgcagggtgggtatgggaaccagggt
gtggtgggtggtagtgtgagctcgggagctacgggaggttatgggaatcatcagatgggg
tatcagaatcagaatcagaatcagcagattggacaaggtggttcgattaggtcgcagcat
ggagttgggaacatgggtggcattaggccttacatgggtcactag

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