Camellia sinensis (tea plant): 114285090
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Entry
114285090 CDS
T07364
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like
KO
K10752
histone-binding protein RBBP4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03082
ATP-dependent chromatin remodeling
csin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114285090
03083 Polycomb repressive complex
114285090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114285090
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
114285090
Histone modification proteins
HAT complexes
HATB complex
114285090
HDAC complexes
Sin3A-HDAC complex
114285090
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
114285090
PRC2.2
114285090
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
114285090
Heterochromatin formation proteins
Other heterochromatin formation proteins
114285090
Chromatin remodeling factors
NuRD complex
114285090
NuRF complex
114285090
NuRF complex (fruit fly)
114285090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_RFWD3
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_IFT140_1st
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
114285090
NCBI-ProteinID:
XP_028083885
LinkDB
All DBs
Position
Unknown
AA seq
495 aa
AA seq
DB search
MESPSPSPVPRKRGRPRKEKPKEEREREESVAEKMREKAEKKPQQQQQSPIDDKYSQWKS
LVPVLYDWLANHNLVWPSLSCRWGPQLEQGKFRNCQRLYLSEQTDGSVPNTLVISNCEVV
KSRVAAAEHIAQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNKNILATHTDCPEVLIWD
VEAQPNRQAVLGAADSHPDLVLTGHQENAEFALAMCPTEPLVLSGGKDKYVLLWSIQDHV
STLTSDAATRPTGSSGAIIKATDNPSIGPRGIFQGHEDTIEDVQFCPSSVQEFCSVGDDS
CLILWDARIGSSPVVKVEKAHNADLHCVDWNPHDENLILTGSADQSVCMFDRRSLTSGGV
GSPVHKFEGHKAAVLCVQWSPDRSSVFGSSAEDGFLNIWDYEKVGKKKEGGASAPNSPPG
LFFRHAGHRDKVVDFHWNAADPWTVVSVSDDCDTNGGGGTLQIWRMSDLIYRPQEDVLAE
LEKFKSHVVECAPKS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggagtcaccttcaccatcaccggtgccgagaaagcgaggcagaccgaggaaagagaag
cccaaggaggagagagaaagagaagagagtgttgcagagaagatgagagagaaagccgag
aagaagcctcaacaacaacaacaatcccccattgatgataagtatagccagtggaaatct
ctcgtccctgtcctctacgattggcttgccaatcacaaccttgtctggccctctctctcc
tgccggtggggtccacaactcgagcaagggaaattcaggaattgtcaacgtctctacctg
tctgagcagactgatggcagtgttccaaatactctggtcatatcaaattgtgaagttgtc
aaatctagggttgcagctgcagagcacatagcacagttcaatgaagaagcacgctcacca
tttgtgaagaagtacaaaactatcatacatcctggagaggtgaacagaatcagggaactt
ccacagaacaaaaatatattagcaacccatactgactgccctgaagttctcatttgggat
gttgaagcacaacctaaccgtcaagctgtccttggagctgctgattctcatccagatttg
gtattgaccggacatcaagagaatgcagaatttgctcttgctatgtgccctactgagcct
ttagtgctctctggagggaaggacaaatatgttcttttgtggagtattcaagatcatgta
tcaacattgacctcagatgcagccaccaggcctacaggatcttctggggcaatcattaaa
gctaccgataacccttccattgggccgcgtgggatctttcaggggcatgaagacacaatt
gaagatgtccagttttgtccatcgagtgtgcaggagttttgtagtgtaggcgatgattct
tgcctaatattatgggatgcacgaattggctctagcccagttgtcaaggttgaaaaagct
cacaatgctgatcttcattgtgttgactggaacccccatgatgaaaacctaattctaact
gggtctgcagatcaatctgtttgcatgtttgatcgccgaagtctaacttctggtggagta
ggatcacctgtccataagtttgaaggtcacaaagctgctgttctctgtgtgcagtggtca
ccggacaggtcatccgtctttgggagttctgcggaggatggtttcttaaatatttgggat
tacgagaaggttggtaaaaagaaggaaggtggagcaagtgcaccaaattctcctccagga
ttgtttttccgacatgctgggcacagagacaaagttgttgacttccactggaacgcagct
gatccatggacagttgttagcgtatctgatgactgtgataccaacggtggaggtggaaca
ctacagatatggcgcatgagcgatttgatttacaggcctcaagaggatgttttggctgag
ctcgagaagttcaaatcacatgtcgtcgaatgcgctccaaagtcttga
DBGET
integrated database retrieval system
