KEGG   Camellia sinensis (tea plant): 114286390
Entry
114286390         CDS       T07364                                 
Name
(RefSeq) uncharacterized protein LOC114286390
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114286390
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114286390
   03041 Spliceosome [BR:csin03041]
    114286390
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114286390
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114286390
Spliceosome [BR:csin03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114286390
SSDB
Motif
Pfam: RRM_1 Cut8 DUF5320 EBNA2_Core Nup35_RRM_2 PRR20 RRM_10
Other DBs
NCBI-GeneID: 114286390
NCBI-ProteinID: XP_028085360
LinkDB
Position
Unknown
AA seq 379 aa
MAITRSGRGRSFPVDNQPYPATSGRGRGRVRGRGRGRGRGRVLIRHRSPSLPLNPTRNQH
RQEEEEPVRNQLVPELQESIAEEEEESVDSLIESLQKESLVALVMEAISNDPHLIERVRN
LAEVDPAQREIWVSQFGRQTALTSETLNSFFGRYGEIENCSINVYQKDAKAESRGYITFK
QRKAAWEAAKEPSHKIGDSYVRCILPSLWRFPNASRWLQLPGYNPVLGCEFRYPYKLPEN
QYAATSSTTEEEEEEPLEKLLEALGTYNLVSLVKEGLMKTPTILASLYKHAEIDPTLRHI
AAYRIGPYFMTNRTIVNSVFEKYGEIERCRFDEDGVQVLFKHRNSAWKVLKEPYLKIGDY
LARCMRPSGSRGMLFWTDS
NT seq 1140 nt   +upstreamnt  +downstreamnt
atggccatcacgcgttccggcagagggcgctccttcccggtcgacaaccagccctacccc
gccaccagtggccgtggccgtggccgtgttcgtggtcgtggtcgtggtcgtggccgtggc
cgtgtccttatccgtcaccgatcaccctccctacccttgaacccaacccgaaatcaacat
cgacaggaggaggaggagcccgtacgaaatcaattagtaccggagttgcaggaatcaata
gcagaggaggaggaggagtctgtagacagccttatagaaagcttacagaaagaatctctg
gtggctctggttatggaagcaatctccaatgaccctcatttgattgagagggttcgtaat
ctggctgaggttgatcccgcccaaagagagatatgggtgtcccaatttggaaggcagacc
gctctcacttctgagacgttgaattctttctttggaagatatggagaaattgaaaattgc
agcatcaatgtctatcagaaagatgcgaaagcagagagccgaggctacattacctttaag
cagcgaaaggccgcgtgggaggcagcgaaggagccatcccataagatcggcgacagctat
gtcaggtgcatactgccctctctttggcgcttccccaatgcttcccgctggttgcaattg
cccggttacaatcctgtgttgggatgcgaattcagatatccatataagttaccagaaaat
cagtacgccgccacctcctccaccactgaggaagaagaagaggagcctctcgagaagctt
ctggaagcgttagggacttacaacctggtttcattagtgaaggaaggactaatgaaaacc
ccaactatactagcgagcctctacaagcacgctgagattgatccgactcttcgacatatc
gcagcttaccgcattggcccctatttcatgactaataggacgattgtgaattcagtattt
gaaaagtacggtgagatagaacgctgcaggtttgatgaagatggtgttcaagtattattc
aagcaccgaaacagtgcatggaaagtgctgaaagaaccatatctaaaaattggtgactac
ctcgcaaggtgcatgcgaccatcagggagccgcggcatgcttttttggacggacagttga

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