KEGG   Camellia sinensis (tea plant): 114287001
Entry
114287001         CDS       T07364                                 
Name
(RefSeq) splicing factor U2af large subunit B-like isoform X1
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114287001
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csin03041]
    114287001
Spliceosome [BR:csin03041]
 Complex A
  U2 snRNP components
   U2 related factors
    114287001
 Complex B
    114287001
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded HI0933_like
Other DBs
NCBI-GeneID: 114287001
NCBI-ProteinID: XP_028086040
LinkDB
Position
Unknown
AA seq 546 aa
MSSYDDDGDRYSSRGGDRGHGGSSPYRHKHKSRESTHERSREKEWNRDRYSGDYKERNER
DNRGRHKNSYGRSMNRDYERHRDYDQDRERHHRHRSRSRSSEKFRKRSRSRSRSRSRSRS
RSPSKSKRTSGFDMAPPVPSFLPGGAVPGQLLGVPQTMPGMLQNMLPFGTTQVNQLGALS
MMPFQAMTQQATRHARRVYVGGLPPLANEQTIATFFSSVMATIGGNSAGTGDAVVNVYIN
HEKKFAFVEMRTVEEASNAMALDGIVFEGVSVRVRRPTDYNPTLAAALGPSQANPHLNLA
AVGLVPGMVGGVEGPDRIFVGGLPYYFTEAQIRELLESFGPLRGFDLVKDRDTGNSKGYG
FCVYKDPAATDIACAALNGLKMGDKTLTVRRATMSNEVVNTEHESILSQAQQHIALQKMV
LQAGGVNLPGVGTGPTTTAETPTKVLCLTELITADELMDDGEYEEILEDMREEGEKFGVL
VNVIIPRPSPNGGEQVPGVGKVFLEYSDATSCAKAKDSLSGRKFGGNVVTAVYYAEDKFY
DRDYSA
NT seq 1641 nt   +upstreamnt  +downstreamnt
atgtctagttacgacgacgatggcgatcggtattccagcagaggaggtgatcgtggtcat
ggaggatcgtcaccgtatcgtcacaagcacaaatctcgtgaatcaacccatgagaggtcg
agggaaaaagaatggaaccgggaccgttattccggggactacaaagagagaaatgagagg
gacaataggggaaggcacaaaaatagttatggtcgttccatgaatcgcgattatgaaagg
catcgtgattatgatcaagatagagagaggcatcatagacatagatcacgttcccgatca
agtgaaaaatttaggaagagatctagatctagatctcgttctcgttctcgttctcgttca
cgctctccttccaaaagcaagcgaacgagtggttttgacatggcaccacctgttccttcc
ttcttgcctggtggtgcagtcccaggtcaattgctaggtgtccctcaaacaatgccagga
atgctccaaaacatgcttccttttgggacaacacaggttaatcaactgggagctctttcc
atgatgccattccaagccatgactcaacaggcaacaaggcatgcacgccgagtttatgtt
ggcggtctccctcctctagcaaatgagcagacaattgcaacattttttagcagtgttatg
gctactataggaggaaattctgctggtacaggtgatgcagttgtcaatgtgtacattaat
catgaaaagaagtttgcatttgtggagatgagaactgttgaagaagcaagtaatgcaatg
gcgttggatggtattgtatttgagggggtgtctgtgagggttcgaagacctacagactac
aaccctacattagctgcagcacttggtcctagccaagcaaaccctcaccttaacttagct
gctgttggacttgtacctggcatggttggcggagttgagggacctgatcgtatctttgtt
ggtggcttgccatactactttactgaagcacagatacgagaattgctggagtcatttgga
cctttgcgtgggtttgacctcgtgaaggatagagacactggaaattccaaaggatatggt
ttctgcgtctataaggatcctgctgcaacggacattgcttgtgctgctcttaatggctta
aaaatgggggataagactctaactgtccggcgcgctaccatgagtaatgaggtggtaaac
acagaacatgaaagtatattatctcaggcacaacaacatatagctttgcagaaaatggtc
ttgcaagctggtggtgtgaatcttcctggagtagggacaggacccacaacaactgcagag
actccaaccaaagttctatgcttgactgagctaattactgctgatgaactgatggatgat
ggagagtacgaggaaattttagaggacatgagggaagaaggggagaaatttggagtcttg
gtgaatgtcattattccccgcccgtcacctaatggaggagagcaggtcccaggtgttgga
aaggtgttcttggagtattctgatgccactagttgtgccaaggcaaaggattcgcttagt
ggccggaaatttgggggcaatgttgtgactgctgtgtattatgctgaagacaaattttac
gatagagactatagtgcttaa

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