Camellia sinensis (tea plant): 114288329
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Entry
114288329 CDS
T07364
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114288329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114288329
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114288329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
114288329
NCBI-ProteinID:
XP_028087635
LinkDB
All DBs
Position
Unknown
AA seq
441 aa
AA seq
DB search
MEVQTSGKPIDQLLEKVLCMNILSSDYFKELYRLKTYHEVIDEIYNQVDHVEPWMTGNCR
GPSTSFCLLYKFFTMKLTVKQMHGLLKHQDSPYIRCVGFLYLRYAADPKTLWNWFEPYVK
DEEEFSPGSNGQMTTMGVYVRDLLLGQEAYFSITALFSSVEFVWYYFDTLFPRIPVPVMR
QIVSNLEKMNLPTKHCGVTGESTRGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPV
RRTMRPPSSDRNGEDDYSRRSPSNRRSQSRDLSDRDYPDRDRVRERDRNRDREKDRERDR
GRDRDRSGDRVRERDRDRDRDRGRDRARERDRDRRYDYERRSGESSRRDYDKSSHDRRSR
SRSRSRSRSQSNQTHSAHPDHHSSPHRDGNKEKTSASSNLAKLRDLYGDLSSQKEDAGRD
RLPNRDSGAEEVIKLGGSTWK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaggtacaaacttcggggaaaccaattgatcagctgttggagaaggttctttgtatg
aacattctctcttctgattacttcaaagagctttatagattgaaaacttaccatgaagtt
atagacgagatttacaatcaagttgatcacgtggagccatggatgactgggaactgtcga
ggtccttcaacttcattttgtcttttgtacaagtttttcactatgaagctcactgtcaaa
caaatgcatggcctgttaaagcatcaagattctccttacataagatgtgttggattcctc
tatttgagatatgctgcagatccaaaaacattgtggaattggtttgaaccatatgtcaaa
gatgaagaggaattctctcctggatctaatggccaaatgaccactatgggcgtgtatgtg
cgtgatttacttcttggacaggaagcatacttcagcataactgcattattctcctctgtt
gaatttgtttggtactattttgatactctctttccccgcatccctgttcctgtaatgcgg
cagattgtatccaaccttgaaaagatgaatctccctactaaacattgtggagtgacggga
gaatccacccgtggatctgatgacactgcccgtcggccaccatctgtaaaagctgccctt
tcagtctcttttggtcaacgtgctcctcatcgtgcatcaactagggattcatcccctgtt
cgccgtacaatgcgaccaccttctagtgatagaaatggtgaagatgattattcacgaaga
tctcccagcaaccgtcggagccagagtcgtgatttgtctgatcgagattatccagaccgt
gaccgagtccgggaacgggacaggaacagggatagagaaaaggacagggaaagggataga
gggagagacagagacagaagcggagatagagttagggagcgagacagggacagggacagg
gacaggggcagggacagggcgcgagaaagggacagagataggcggtatgattatgaaaga
aggtccggagaaagcagcagaagggattatgataagagcagccatgatcggagaagcagg
agcaggagcaggagcaggagcagaagtcaaagcaaccaaactcatagtgcacatcctgat
catcattccagcccacatagagatggcaacaaggaaaagacttctgcatctagcaatctg
gccaagcttagagacttgtacggcgacttgagcagtcagaaagaggatgctggaagagat
aggctgcctaatagggatagtggtgcggaagaggttatcaagcttggaggttccacttgg
aagtag
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