Camellia sinensis (tea plant): 114288330
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Entry
114288330 CDS
T07364
Name
(RefSeq) pre-mRNA splicing factor SR-like 1 isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114288330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114288330
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114288330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
114288330
NCBI-ProteinID:
XP_028087641
LinkDB
All DBs
Position
Unknown
AA seq
360 aa
AA seq
DB search
MTGNCRGPSTSFCLLYKFFTMKLTVKQMHGLLKHQDSPYIRCVGFLYLRYAADPKTLWNW
FEPYVKDEEEFSPGSSGQVTTMGVYVRDLLLGQYYFDTLFPRIPVPVMRQIVSNLEKMNL
PTKHCGVTGESTRGSDDTARRPPSVKAALSVSFGQRAPHRASTRDSSPVRRTMAPPSYDR
NGKDDYSRRSPSNRRSQSHDLSDQDYPDRDQDQDRDREWDRNRDRDRGRDSDRKGDRVRE
RERDRDRGQERDRDRRYDYERRSRESSRREYDKSSRDRRSRSRNRSRSQSNQSHSAHPNH
HPSPHRDDNKEKTSASSNLAKLRDLYGDLSSQKEDSAKDRLPNRDSGAEEVIRLGGSKWK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgactgggaactgtcgaggtccttcaacgtcattttgtctcctgtacaagtttttcact
atgaagctcactgtcaaacaaatgcatggcctgttaaagcatcaagattctccttacata
agatgtgttggcttcctatacttgagatatgctgcagatcccaaaacattgtggaattgg
tttgaaccatatgtcaaagatgaagaggaattctcccctggatctagtggccaagtgacc
actatgggtgtgtatgtgcgtgatttacttcttggacagtactattttgatactctcttt
ccccgcatccccgttcctgtaatgcggcagattgtatccaaccttgaaaagatgaatctc
cccactaaacattgtggagtgactggtgagtctacccgtggatctgatgacactgcgcgt
cggccaccatctgtaaaagctgccctttcagtctcttttggtcaacgtgctcctcatcgc
gcatcaactagggattcatcccctgttcgccgtacaatggcaccaccttcttatgataga
aatggcaaagatgattattcgcgaagatctcccagcaaccgtcgcagccagagtcatgat
ttgtctgatcaagattatccagaccgagaccaagaccaagaccgagaccgggaatgggac
aggaacagggatagggatagaggaagagacagcgacagaaagggagatagagttagggag
cgagaaagggatagggacagggggcaagaaagggacagagataggcggtatgattatgaa
agaaggtccagagaaagcagcagaagggaatacgataagagcagccgtgatcgtagaagc
aggagcaggaataggagcagaagtcaaagcaaccaaagtcatagtgcacatcccaatcat
catccaagtccacatagagatgacaacaaagaaaagacttctgcatctagcaatctggca
aagcttagagacttgtacggagacttgagcagtcagaaagaggattctgcgaaagatagg
ctgcctaatagggatagtggtgcggaagaggttatcaggcttggaggttctaagtggaag
taa
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