KEGG   Camellia sinensis (tea plant): 114288455
Entry
114288455         CDS       T07364                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03030  DNA replication
csin03410  Base excision repair
csin03420  Nucleotide excision repair
csin03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    114288455
   03410 Base excision repair
    114288455
   03420 Nucleotide excision repair
    114288455
   03430 Mismatch repair
    114288455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csin03032]
    114288455
   03036 Chromosome and associated proteins [BR:csin03036]
    114288455
   03400 DNA repair and recombination proteins [BR:csin03400]
    114288455
DNA replication proteins [BR:csin03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    114288455
  DNA Replication Termination Factors
   ELG1-RFC complex
    114288455
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    114288455
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     114288455
  Check point factors
   HRAD17(Rad24)-RFC complex
    114288455
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_16 AAA_22 AAA_assoc_2 AAA_11 ATPase_2 AAA_24 AAA_30 DUF815 AAA_14 AAA_5 RuvB_N DNAX_ATPase_lid AAA_7 ResIII AAA_19 AAA_3 bpMoxR AAA_2 SLFN-g3_helicase DUF3086 nSTAND3 AAA_25 TniB TIP49 AAA_28 Mg_chelatase ABC_tran RNA_helicase
Other DBs
NCBI-GeneID: 114288455
NCBI-ProteinID: XP_028087765
LinkDB
Position
Unknown
AA seq 350 aa
MAEVISLMDIDDDNHSLKSNNNLRKATPWVEKYRPQSLSDVAAHRDIIDTIDRLTSENRL
PHLLLYGPPGTGKTSTILAVARKLYGSQMHNLVLELNASDERGIDVVRQQIQDFASTQSF
SFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTR
FRFAPLDAINVSERLKHVIQAERLDVPECGLKALVRLSNGDMRKALNILQSTHMASQQIT
EEAVYLCTGNPLPKDIEQISHWLLNESFAVSFRRISEMKTRKGLALVDIVREVTMFVFKI
KMQSGVRVQLINDLADIEYRLSFGCNDKLQLGSLISTFTRARSALVAAAK
NT seq 1053 nt   +upstreamnt  +downstreamnt
atggcggaggtaatctctctcatggacatcgacgacgacaaccactctctcaaatccaac
aacaacctccgaaaagccactccatgggtcgaaaagtaccgccctcaatccctctccgac
gtcgcagcccatcgagacatcatcgacaccattgataggctaactagcgagaacagattg
ccccatttgttactctacggtcctcccggcaccggcaagacctccaccattctcgccgtg
gctcgcaagctatatgggtcgcagatgcacaacttggttttggaattgaatgcttccgat
gaacgcggaatcgatgtcgtcaggcaacagattcaggattttgctagcactcagagcttc
tcatttggtgcaaaagcatcagtgaagttggtcttattggatgaagctgatgccatgaca
aaggatgcacaatttgcccttcgtcgagtgattgagaagtacacaaaaagcactaggttt
gcacttatctgtaatcatgtcaacaagattattccagctctgcaatcaagatgtactcgt
tttcggtttgctcctcttgatgccattaatgtcagtgagcgacttaaacatgttattcag
gctgaaaggcttgatgtacctgagtgtggcttaaaggcacttgtacgacttagcaatggt
gacatgagaaaggctttgaacattttacagtcaacacatatggcttctcagcagataaca
gaagaagctgtctacttgtgcactggaaatccattgcccaaagacatcgaacaaatatct
cactggcttctgaatgaatcatttgcagttagttttagacgaatatctgaaatgaagaca
aggaaaggattagctttggtggatatcgtaagagaagtaaccatgtttgtctttaagatc
aagatgcaatcaggtgttcgagttcagctaatcaatgacttggctgatattgaatacagg
ttgagttttggatgcaacgataagttgcagcttggatcgctcatttctacctttacacgg
gctcgatctgcgctggttgcagctgcaaagtag

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