Camellia sinensis (tea plant): 114288644
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Entry
114288644 CDS
T07364
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog A-like isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csin03036
]
114288644
03400 DNA repair and recombination proteins [BR:
csin03400
]
114288644
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
114288644
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
114288644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
HEAT_GCN1_C
Xpo1
Motif
Other DBs
NCBI-GeneID:
114288644
NCBI-ProteinID:
XP_028087997
LinkDB
All DBs
Position
Unknown
AA seq
1658 aa
AA seq
DB search
MQPFLNGIAKPGLLKHQDREVALLVATCFCEITRITAPEAPYSDDVLKDIFHLIVSTFSG
LNDTSGPSFGRRVGILETLARYRSCIVMLDLECDDLVNQMFSTFFSVASEDHSESVLTSM
QTIMIVLLEESEDVREDLLLVLLSVLGRNKSNFTISARRLAMNVIEHCAEKLEPGVKQFL
ISSMSGDNGPLKFQIDYHEIIYDIYRCAPQILSGIVPYLTGLLLTDQLDIRLKAVSLVGD
LFALPGSAISETFQPIFSEFLKRLTDRVVEVRMSAIEHAKSCLVSNPFRSEAPQIISAFC
DRLLDNDENVRKQVVAVICDVACHALPSIPVETLKLVAECLRDKSLLVKKYTMERLVEIY
RIFCLSRSNGATETDDFDWIPGKILRCFYDKDFRSDTIEPILCGSLFPAEFSVKERVGNW
IRVFSGFDKIEVKALEKILEQKQRLQQEMQRYLSLRQSHQEHDTPELQKKILFCFRIMSH
CFNDPAKAEESFQILDQLKDANIWKSLTTLLDPDTSCLQACSCRDDFLKILGEKHQLYDF
LSMVSLKCSYLLFNKEHVKEILLEADLQKSAGHAQFTLACMNILVILASFSPLLLSGIEE
DLVHLLKDDNEVIKEGVLHVLAKAGGTIREQLGISSSSLDLILERICLEGSRRQAKYAVH
ALAAITKDDGLMSLSVLYKRLVDMLEEKTHLPAVLQSLGCIAQTAMSVFETREDEIEGFI
KRNILECSNKADDGQKECWDDRSERCSLKIFGIKTLVKSYLPVKDAHLRHGIDGLLEILK
NILLFGEILKDIESSPVDKAHMRLAAAKAVLRLSKHWDHKIPINLFYLTLRISEISFPQA
KKQFLNKVHQYLKEWLLDPKYVCAFLFDINGSHQADFEEGKHNLRDIIQTCHQGKAQQLS
LQWDTNSAVNYPEYILPYLVHALAHHSSFPNVDDCRDVKAFEPAYRQLHLFLSMLMHGDE
DCKPEVSIDKGKESISAIISIFQCIKCSADTVDPAKSKNSHAICDLGLSIIKRLAHKEDD
LQESIVSVSLPPVLYKLRDKKGEEGNDPLVSEGQTWLADESVLTHFESLKLEVKGTHQIH
PEVDDDVLKDSETDGNDVPLGKMIKRLKAKGSKARKVVKNESFPDGTKNEDDVDILKMVR
EINLDNLGISGKFESSNGHENGHEDVPKKMNIDQKQQKRKKSLASETTNVPIPKRRRSSA
QGAYKFSIPKDTLKGSKWTSIHNLPEEERSSFESPERDEELHGGSEDKMSLQENVVEPAE
SHLSVTCFPKNMNSLSKHKSKSSDKDHTDEVYKVGEIDDYERHNKLVDTDGTKAISNSKA
STTSVKKRKRRSLVGLAKCTSKEGGSETMDLIDCRIKVWWPMDKKFYEGVVKSYDPQKKK
HVVLYDDGDVEVLCLDKERWELIDNGHKPTKKSKPSKGSPHKELSSEEKNKFLSSSQQNK
KSIDINSPSKIRGKRTPRKNLKHVQKGASKSKTTSELLEADSRGSPGISDPEHAEMHKHD
DMNSGGEHIETTEKSLTDGEESDKDQELASEGKLAEDAKNAPSDIEKSEQEEPNSEEKTI
KPLVGTGGSNEDGSPGVEEKQPDDVLREGTREEADKADQSKQTDSEETEADDHESNPIDQ
DRNDKKTLASSDSGEAEISDDEPLSLWKHRVGKPVQGK
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atgcagccttttctgaatgggatcgctaaaccaggacttctaaagcatcaagatagggaa
gttgcgcttcttgttgctacctgtttttgtgagataactcggattactgcacctgaagct
ccttacagcgatgatgttttaaaggacatttttcatttaatagtcagcacctttagtggt
ttaaatgataccagtggtccatcttttggaaggagagttggcatattggagactcttgca
agatatagatcatgcattgtgatgttggatcttgaatgcgatgatctagtcaaccaaatg
ttcagtacatttttttctgttgccagtgaagatcattcagaaagcgtgctaacatcaatg
caaacaatcatgattgttctcttagaagagagtgaggatgtacgggaggatcttttactt
gttttattgtctgttttaggccggaataaaagtaattttacaatctctgcgcggaggctt
gctatgaatgttatagagcattgtgctgaaaaactggagcctggcgtgaagcagttcctt
atatcatcaatgtcaggggataatgggcctttaaagtttcaaattgattaccatgaaata
atctatgacatctatcgttgtgctcctcagatcttatcaggaattgtcccatacctaaca
ggattgctactgacagatcaattagacatccgtttaaaagctgttagtctagttggtgac
ctttttgctctgccgggatctgctatctctgaaacatttcaacctatattttcggagttt
ttgaaaaggttgactgatagagtagttgaggttcgaatgtctgccattgaacatgccaag
agttgtcttgtgtcaaatcctttcagatctgaagctccgcaaattatctctgctttctgt
gaccggctgctggacaacgatgaaaatgttcgtaaacaagtggttgctgtaatttgtgat
gtggcatgtcatgccctgccttccattccagttgaaactttgaagcttgtcgcagagtgc
ctccgagacaaatctctacttgttaaaaaatataccatggagaggctggttgagatttac
aggattttttgcttgagccgctccaatggcgcaactgaaactgatgattttgattggatt
cctggaaagatattgagatgcttctatgacaaagatttcagatcagatacaattgaaccc
atcttatgcgggtccctgttcccagctgaattctcagtcaaggaaagggttggaaattgg
ataagagtcttctcaggatttgacaaaattgaggttaaggctcttgaaaagatactggag
cagaagcaaaggttacaacaagagatgcagaggtatctttctcttaggcagagtcatcag
gaacacgacactcctgagttacaaaaaaagatactgttttgcttccggattatgtctcac
tgttttaatgatcctgcaaaggctgaggagagttttcaaattcttgaccagttaaaagac
gctaatatctggaagagcttgacaactctacttgatccagacactagctgtcttcaagct
tgtagttgtcgggatgattttcttaagatccttggcgagaaacatcaactctatgatttt
ttgagcatggtctctctgaaatgctcatatttacttttcaataaggagcatgtgaaggaa
atccttttggaggctgacttacagaaatctgctggacatgcacaatttaccctagcttgc
atgaatattcttgtgattcttgcaagtttcagccctttgcttcttagtgggattgaagaa
gatttggtgcatcttcttaaagatgataatgaagtaattaaagaaggtgttttgcatgtt
ctggcaaaggctggtggaaccattcgagagcaactgggaatttcatccagttcactagac
cttatactggaaaggatatgtttagagggcagtcgaaggcaggccaagtatgctgtacat
gccctagcagcaataacaaaggatgatggtctaatgtcactctcggtcttgtataagagg
cttgtggatatgctggaggaaaagacacatctgcctgctgtactacaatctttggggtgc
atagcacagactgcaatgtcagtttttgaaacaagagaggatgaaattgaaggatttata
aaaagaaatattctagagtgcagtaataaagcagatgatggacaaaaagaatgttgggat
gaccgaagcgaacgttgttcattgaagatctttggcattaaaacattggtcaagagttac
ttgcctgtcaaagatgctcaccttcgtcatgggattgatggcctattggagatccttaaa
aacatacttttgtttggagaaatcttgaaagatattgaatcgagtccagttgataaggct
catatgaggcttgcagcagcaaaggcagttcttcgtctatcaaagcattgggatcataag
atacccattaatctgttttacctaaccttgagaatatcagagatcagtttccctcaagct
aagaagcaattcctgaacaaagttcatcaatatctaaaggaatggcttttggatccaaaa
tatgtttgtgccttcttatttgatataaacggatcccaccaagcagattttgaagagggc
aagcataacttacgtgatattattcagacatgtcatcaagggaaggcacagcaactttca
ttgcaatgggatacaaactccgcagtgaattatccagagtacatactcccatacttggtt
catgctcttgctcatcattcttcatttccaaatgttgatgattgtagagatgtcaaggct
tttgaaccagcatacaggcaattgcacttatttctttctatgctcatgcatggagatgaa
gactgcaagccagaagtcagcattgacaagggcaaagagagtatatctgcaataatttct
atctttcagtgtattaagtgctcagcagatacagttgacccagcaaagtccaagaactca
catgcaatttgtgaccttggcctgtcaatcatcaagcgcttagctcataaagaagacgac
cttcaagaatcaattgtatcagtgtccctccctccagttctgtacaaactgcgtgacaag
aaaggagaagaagggaatgaccctctggtcagtgaaggacagacgtggttggctgatgag
agcgtcttgactcactttgaatcactcaagttagaagtcaagggaacgcatcagattcat
ccagaagttgatgatgatgttctgaaagacagtgagacagatggaaatgacgtgcctttg
ggcaaaatgataaaacgccttaaagccaagggaagtaaggcaagaaaagtggtgaagaac
gaatcttttccagatggaacaaaaaatgaagatgatgttgatatcctgaaaatggtgaga
gaaatcaatttggataatctggggatatctggtaagtttgagtcaagcaatggtcatgaa
aatggtcatgaagatgttccaaagaaaatgaacattgatcagaagcagcaaaaaaggaaa
aaaagtttggctagtgaaacaacaaatgttccaatacccaaacgccggagatcttctgct
cagggtgcttacaaattctccatcccaaaggatactttaaagggttctaagtggacttca
attcataatttgcctgaggaagaacggtcatcatttgagtcccctgaaagagacgaggaa
cttcatggtggttctgaagataaaatgtccttgcaagaaaatgtggtcgaaccagctgaa
tcacatttgtctgtaacgtgctttcccaagaatatgaactccttgtcaaaacataaaagc
aaaagttctgacaaggatcatactgatgaggtgtataaagttggagaaattgacgactat
gaaaggcataataagcttgtggacactgatggtacaaaagcaattagtaattccaaggct
tccacgacatctgtaaaaaagcgaaaaagaagaagccttgtgggattggcaaagtgcacc
tcaaaggaaggtggaagtgagacgatggacctgattgattgcagaataaaagtttggtgg
ccaatggataagaaattttatgaaggagtggtgaagtcttatgatcctcaaaaaaagaaa
catgtggttctatatgatgacggagatgtggaagtgctttgtttagataaagagcgctgg
gagcttattgacaatggtcacaagcctacgaagaagtcaaaaccatcaaagggttcccct
cataaagaattatcatctgaggagaaaaataagtttttgagcagttcacagcaaaacaaa
aaatcaattgatataaattcaccatctaaaataagagggaaaagaactccaaggaagaat
ttgaagcatgtacaaaaaggtgcatcaaagagtaaaactacttcagaattgttggaagct
gatagcagagggagccctgggatatcagaccctgaacatgctgaaatgcataaacatgat
gatatgaactcaggaggggaacatattgaaacaacagagaagagtttaacggatggggag
gaatctgacaaggatcaggagttggcttctgaagggaaactagcagaggatgcaaagaat
gccccaagtgatattgaaaaatccgagcaagaggagcctaattctgaagagaaaacaatt
aagcctttggtaggtactgggggatcaaatgaagatgggagtcctggtgtagaagagaag
caaccagatgatgtattaagggaaggaactagagaggaagcagataaagcagaccagtca
aagcagacagattctgaagagactgaagcagatgatcatgagagtaatccgatcgatcaa
gacagaaatgacaaaaagacgttagcttcttctgattctggtgaagcagagatttccgac
gatgagcctcttagcctgtggaagcatcgtgtgggaaaaccagtccaaggaaaatag
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integrated database retrieval system
