Camellia sinensis (tea plant): 114288706
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Entry
114288706 CDS
T07364
Name
(RefSeq) small subunit processome component 20 homolog isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114288706
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114288706
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
Motif
Other DBs
NCBI-GeneID:
114288706
NCBI-ProteinID:
XP_028088069
LinkDB
All DBs
Position
Unknown
AA seq
2684 aa
AA seq
DB search
MATAAEAQAVKSLNKSPGRRRFVFKTFSQRIEEIDVDVFRSLDPLKSEPSEGSSFFRDCL
VEWRELNTADDFISFYEEMMPLVQTLPQIILQKELILSKLISRLQMKGRLSLEPILRLIA
ALSRDLLEDFPPFLQRVADSLVSLLKSGADREPEIIEQIFTSWSYIMMYLQKYLVRDVVH
VLRVTGKLRYYPKNYVQEFMAEAVSFLLRNAPIEQLIKGTRKVMVEVAKKPLVFRKSGVS
ALLWYVLRGTSSKLHSRAEQVLRLLVDNSIIGIGDKFAQGSDSVVEVVTAAFQRLCEELE
PTELNLMWGCLYEEITDAVSNGCLLHLSRLLSLLISTVQIDYVRKISDYQLMLQVVGVLM
QKFILPARILKTEDQSTEVVDKVLQLMLCILDGLHLADNVPVLSSVSVQWAPVFDLRNSS
LLTFIKQLLLKDPRVVHAFRQNTIRALNDLIETSEEEVVPLLLTFCERLEVQIQSSSFID
GTSKEEVSRICSYLPDAIGYWIGIINQIVHGDSSVIQLQETKLALLWGIISCYPYMKDIQ
ADPSLLLDFVDTLSRLLAIESDNIAGFHKHTWESLIGAALSSYNKMRSGNIRDEEVSKFL
QLARRYTFSSQILSSVADFLDSMDGPSNVVLHPDLKAEKAMESLAIFAENLCHSDKLIRH
STLRILCHYELLNCEHASEDQHAEKKMRTEVSQSWFADDRGSNVLQLLLSIEETPLSVTT
SRKVILSISRIQMGLSSTNISEAYLPSVFYGIIGIFHNRFSYLWNPAMECLAVLTSKYFE
MVWDIFVQYLQQCEYSFVSSHDQSDGSKTVSTIQSSDLVERFNLFVSPPSDSNPGTTVWS
LLIQSLQKIPTVIESRSRQIVPLFLMFMGYNMNDVVSVGSFNQHACKGKEWKSVLKEWLN
LLKLMRNPRSFYKGQFLKEVLQYRLLDENDPEIQMKVLDCLLNWKDDFLLPYDQHLKNLI
SSKSLREELTTWSLSKESNHIEEHHRTYLVPLVTRILIPKVRKPKTLASRKHTSVHLRKA
VLGFLAQLDINELPLFFALLLKPLLSISERFDGISKWFLSSSEWSKDEFDSFGLLKYFTM
DNILAISWKKRYGFLHVIENILGVFDEFHVKPYLDLLMGCVVRILGSCTSILESGKSTGL
AAVETDSSFKLTVHEKGGGAENQITTSIAMKQFKELRSLCLKIISLVLNKYEDHEFGSEF
WDLFFASVKPLIDGFKQEGASSEKPSSLFSCFLAMSRSYKLVSLFCREKNLVPDIFSILS
VTTASEAILSSVLKFVENLLNLDSELDHEDNAIETVLLSNLDALICSLHGLFKFNSAARR
KLVKSPGERELNIFKLLSKYIKDPSSASKFVDIMLPMLMKGAQNSDACVEALQAIRHIIP
VLGTESTTEILNAVSPLLISVGLDVRMSICDLLDALAGSDSSVIAVATLLRELNATSAME
MGGLDYDSIISAYDKINEDFFYTVREKHALVILSHAVHDMSSGELILRQSGYRLLLSFVE
FSAGIVDRELKSDDQFWSEACIQRIINKFLFKHMGDAMNKETPIQKVWLDLLREMVLKLP
KVSSLESFRLLCSEDAEQDFFNNIIHLQKHRRGRALLRFSNFVSSGNLSEVITNKVFVPL
FFNMLFNVQHGKAENIRSGCLEALASISGNMEWKSYYAFLMRCFREMTLKSDKQKVLMRL
VCAVLDHFHFMETHSCQESNDSVVDVSKAGTTALTSSVLHTYTSSAEVSEIQSCLHKTVL
PKIQKLLTSDSDNVNVNISLVALKLLKLLPDDVMELHLPSIVHRISNFLKNRLESIRDEA
RTALTACLKELGLEYLQFIVKVLRATLKRGYELHVLGYTLNFSGKLDYCLEELLSVVEND
IFGDVSEEKEVEKIASKMKETRKRKSFETLKLIAQNITFKTHALKLLSPVTTCLQKHLTP
KMKSKLETMLNNIAAGIECNPSVNQTDLFIFLYGLIEDGITHETRAKANQQSGDEASCKT
ITSGRLIDSGSQSSHLITVFALGVLHNSMKNTKLNKKDEQLLSMLDPFVRLLTDCLTAKY
EDIISAALRCLAPLVRLPLPSLESQADKIKTSLLVIAQGSVNAGSPVMQSCLSLLTVLLR
STRITLSTDQLHMVIQFPLFIDLERNPSFVALSLLKAIVNRKLVVHEIYDLVTRVAELLV
TSQVEPIRKKCSQILLQFLLDYHLSEKRLQQHLDFLLSNLRYEHSTGREAVLEMLHAIVI
KFPKAIIDEHSQTIFVHLVVCLANDYDNKVRSMTGAAVKLLIGHVSPHSLHSILEYSLSW
YLGGKQHLWSAAAQVLGLLVEVMRKGFQKHVNGVLPVMRSIFQSAINVLTNGQLDLSVEA
TVPFWKEAYYSLVLLEKILHQFHDLFLAKDLEDIWEMISELLLHPHMWLRDVSNRLVALY
FASVTEANRENHEKSLETVFLMRPSRLILIAASLCCQLKAPLIDNTASTIVTQNLSFTIC
GIHSLLVPKKWIDGQSFGYTLEHDEEGCFLKAFQKLDSRKGRSMFASLTSGDNNQNDQEN
SGHHQSLLVSYLLKRMGKIALQMEAVQMKIVFNVFKSITPKIIDPEKLSSQTDYFQGYAY
QMLLPLYKVCEGYAGKVIPDDAKQLAQEALQSIRDTLGMNNFIQLYSQIRKNLKAKREKR
KQGEKLMAVVNPMRNAKRKLRVAAKNRANKKRKIGTMKMTKWMR
NT seq
8055 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggcggaagctcaggccgtgaagtctctaaacaaatctccaggtcgcagg
cgctttgtgttcaagactttctctcagcgtattgaggaaattgatgttgatgtcttccga
agtctcgatcctctcaagtccgagccctccgaagggtcctcttttttccgggactgcctt
gttgagtggagggaattaaacactgcggatgattttatttccttttatgaggagatgatg
cccttggtgcaaacattaccacaaataatactgcagaaggaattgatattgtcgaaactt
atttctagattgcaaatgaaagggagactatcacttgagcccatactcaggttgatagca
gccttgtctagagatcttctggaggactttccccccttcctgcagagggtagctgattct
ctggtatctcttctcaaaagtggagctgatagagaaccagagataattgagcagattttt
acatcatggtcgtatatcatgatgtatttgcagaaatatcttgtacgggatgttgtccat
gttctcagggttacaggcaaactaagatattatcccaagaattatgtccaagaatttatg
gctgaggcagtgtcattcttgttgagaaatgcacctattgagcagcttataaagggtact
agaaaagtcatggttgaagttgcaaagaaaccactggtgtttagaaaatctggagtcagt
gctttactatggtatgttttgagaggaacttcatcaaagttgcattcaagagcagagcaa
gtgttacgattattggtggacaactcgataattggtattggtgataaatttgcccaaggc
tcagactctgtggttgaagttgtaactgctgcctttcaaaggctatgtgaggaacttgag
cctactgagttgaatttgatgtggggttgtttatacgaggaaataactgatgctgtatct
aatggatgcttgttgcacctcagtcgcctgttatccttgctgatttctactgttcaaatc
gattatgtccggaaaatttctgattaccaacttatgcttcaagtagttggggtgcttatg
cagaagtttatattgcctgcgagaatactgaagacggaagaccagtctactgaagttgtt
gataaggttctgcaattaatgctttgcattcttgatgggcttcatctagccgataatgtg
ccagttctttctagtgtttctgtgcagtgggctcctgtgtttgatttaaggaattcaagt
ttactgacttttatcaaacaattgctattgaaagatcctcgtgtagtccatgccttcaga
cagaataccatacgtgcattgaatgatttaatagaaacttcagaggaagaagttgtacct
ttgctacttaccttctgtgaaagactagaagttcaaattcaaagctccagcttcatagat
ggaacatccaaagaagaggtttcgaggatttgcagttacttgccggatgctattggctac
tggattgggattatcaatcaaattgtgcatggtgattcatcagtcattcaacttcaggag
actaaattggctttgctgtggggaataattagctgctatccttacatgaaagacatccaa
gcagacccatccttattacttgattttgtagatacacttagtcggcttctggcgattgaa
tctgacaatattgcagggtttcacaaacacacttgggaaagcctaattggtgctgctttg
agttcctataacaaaatgcgttctggtaacatcagagatgaagaagtgagcaaatttttg
caacttgctaggagatacacgttctcatcacaaatattatcttctgtagctgattttttg
gattccatggacgggcctagcaatgttgtattgcatccagacctcaaagcagagaaggct
atggaatcattggccatttttgctgagaatttgtgccactcagacaaactgatccgtcat
tccaccctaagaatattgtgccattatgaacttctaaattgtgagcatgcttctgaggat
cagcatgctgagaaaaaaatgagaactgaagtttctcaatcttggtttgctgatgaccgg
ggcagtaatgttcttcaactccttctctccattgaggaaacacctctttcggttactacc
agcaggaaagttatcctatcgatttcaagaatacagatgggcctctcttctacaaatata
tctgaagcatatttgccctctgttttttatgggataattggcatcttccataaccgattt
agctatctatggaacccagcaatggagtgccttgcagtcttgacaagcaagtattttgaa
atggtatgggatatatttgttcagtatctgcaacaatgtgaatatagttttgtgtcatct
catgatcaatctgacggaagcaaaactgtatctactatccagtccagtgatttggttgaa
cgtttcaatctatttgtctctccgccatctgacagcaaccctggcacaacagtttggtcc
ttgttgatccagtctttacaaaaaattccaactgtcatagaatctcgatctcggcaaatt
gtacctttgttcttgatgtttatgggttacaatatgaatgatgttgtgagtgtaggatca
ttcaaccagcatgcttgtaaagggaaagaatggaagagtgtccttaaggagtggttgaac
ttgttgaaattgatgcgaaatcccaggtccttctacaagggtcaatttcttaaggaagtt
ctgcaatataggcttcttgatgaaaatgatcctgagatacagatgaaggttcttgattgc
ttgttgaattggaaagatgattttttactcccctatgatcagcatctgaaaaatctgatc
agttcaaagagtctgagagaggaactaacaacgtggagcttgtcgaaagaatctaatcac
attgaagaacatcatagaacttatcttgtacctttagttacccgaattttgataccaaaa
gtccgaaaaccgaaaacactggcatctcgaaagcatacaagtgtacatcttcgaaaggca
gtccttggattcctagctcaactcgacatcaatgagcttcctctgttttttgccctgcta
ctcaagccattgctaagcatttcagaaagatttgatgggatcagtaaatggtttttgagt
tcgtctgaatggtctaaagacgaatttgactcatttggtcttttgaagtacttcaccatg
gataacatattggccatctcttggaagaagagatatggttttttgcatgtaattgaaaat
attcttggtgtttttgatgaatttcatgttaaaccataccttgatttgttaatgggatgt
gttgtccgcatattggggagctgcacatcaattcttgagagcgggaagagtactggatta
gctgcagtggaaacagattctagctttaaactaactgtgcatgagaaaggtggtggagca
gaaaatcagatcacgactagcatagctatgaagcagtttaaggagctaaggtctttgtgc
ttgaagatcatttctttggttctaaataaatatgaggaccatgagtttggtagtgaattt
tgggacctgttctttgcttcagtgaaacctttgatagatggcttcaagcaagaaggtgct
agtagtgagaagccaagttcattattttcttgctttcttgctatgagcagaagctacaag
cttgtatcattgttctgtagagaaaagaatcttgtccccgacattttttcaatccttagt
gtcacaacagcttccgaagccattctatctagtgttttgaagtttgttgagaacctattg
aatcttgacagtgaactcgaccatgaagacaatgctatcgagacagtactgctttcaaac
cttgatgcactaatctgcagtttgcatggtctttttaagttcaatagtgctgcaaggagg
aaattggtgaaaagccctggggaaagagagctcaatattttcaagttattatcaaagtat
ataaaggatccttcatcagcaagtaaatttgttgatatcatgctccctatgctaatgaag
ggggctcaaaattctgatgcatgtgtggaagctttgcaggccattcgacatataatacca
gttttagggactgaaagtacaacagaaattctgaatgcagtttctccactgcttatttct
gttggtctggatgtacggatgtctatatgtgatcttcttgatgctcttgctggaagtgat
tcttccgtaattgctgtggcaacacttcttcgtgaactgaatgcaacctctgctatggaa
atgggtggtcttgactatgacagtatcattagtgcttatgacaagatcaatgaagacttc
ttttacacagttagagagaagcatgcattagtcattttgtctcatgctgtgcatgacatg
tcatccggagaactaattttgaggcaaagtggatatagattattgctttcatttgttgaa
ttttctgctggaattgttgatcgagaattgaagtctgatgaccagttttggtctgaagcg
tgcattcaacggataattaacaagttccttttcaaacatatgggagatgcaatgaacaaa
gaaactcctattcaaaaggtgtggcttgatttactacgagaaatggtgttgaagcttcca
aaggtctcaagccttgaatcatttaggcttctgtgcagtgaagatgcagaacaagatttc
tttaacaatattatacatttacagaaacacaggagaggaagggctttgttacgctttagc
aactttgttagttcagggaatttgtcagaggttatcacaaataaagtgttcgtgcctctc
tttttcaacatgttatttaatgttcaacatggaaaggcagaaaatataaggagtggatgt
ttggaggctcttgcatctatttctggtaacatggaatggaagtcgtactatgcatttctc
atgagatgcttccgagagatgaccctgaaatcagacaagcagaaggtcttaatgcggctt
gtctgcgcagttctggaccactttcattttatggaaactcattcttgtcaagaatccaat
gattctgttgtcgatgtatcaaaagctggcaccactgcattgacttcatctgtgttgcac
acatatacgagttctgctgaggtttctgagatacaatcatgtctccataaaacagtgctt
cctaagatacagaaattgttgacgtctgattctgataatgtcaatgtcaatatcagtctt
gttgcactgaaactgctaaagttgcttcctgatgatgtcatggaattacatcttccaagt
attgtccatcgcatttcaaacttcctcaaaaatcgtttggaaagtatacgtgatgaagct
aggactgctttgactgcctgtttgaaggagctggggttggagtacctgcagttcattgtc
aaagtcttgagagccaccttaaaacgaggatatgagttgcatgtattgggatatactctt
aattttagtgggaagttggattattgtttggaagaacttctttctgtggtggagaatgat
atttttggagatgtttctgaggaaaaggaagtggaaaagattgcttcaaaaatgaaagag
actagaaagcgcaagtctttcgaaaccctgaaattaattgcccaaaacatcacattcaaa
acgcatgccttgaagttgctttcacctgttacaacttgtctgcagaagcatttaacccca
aaaatgaaatcgaaattggaaactatgttaaacaacatagctgctggtattgagtgcaat
ccatcagttaatcagacagacctctttatctttttatatggcctcatagaagatggcatt
acccatgaaactcgtgcaaaggccaatcagcaatctggagatgaggcaagctgcaaaact
attacatcaggcaggttaattgactctggctcacaatcttcacatcttattacagtgttt
gctcttggggtgctgcacaattccatgaagaatactaaacttaacaaaaaggacgaacaa
ctgttatcaatgttggatccttttgtaagattgctcactgactgcttgactgccaaatac
gaagatatcatttctgcagcgctcaggtgccttgctccactggtgaggctgcctctacca
tctcttgaatcacaagctgacaagataaagacctctctgttggttatagctcaaggctct
gtaaatgctggcagccctgtgatgcaatcatgtctaagtttgctaacagtgcttctgcgg
agcactaggattacgctttccacagatcaattgcatatggtgatccagtttcctttattt
attgatctcgaaagaaatccctcgtttgttgctctttcacttttaaaggctatagtgaac
cgcaaacttgtagtccatgagatatacgatcttgtgactcgggttgcagaacttctggta
acaagtcaagtggagccaattcgcaaaaaatgcagtcaaattctattgcaattcttactt
gactatcatctttcagagaaacgtttgcagcagcatcttgatttcttgctttcaaatctg
aggtatgaacattcgacgggaagagaagctgtgcttgaaatgctccatgcaattgtaatc
aagttcccaaaagccattatagatgagcattcccagaccatatttgttcatttggtggtt
tgtttggctaatgattatgacaacaaagtccgctccatgactggcgctgctgtaaagctt
ctgattgggcatgtgagcccgcattcacttcattccattctcgagtatagtctctcttgg
tacttaggtggaaagcagcatttatggagtgctgcagcccaggtcttgggattattggtt
gaagtaatgaggaaaggctttcaaaaacatgtcaatggtgtgttgccagtgatgagaagc
attttccagtctgctatcaatgttcttacaaatggacagctagatctttctgttgaagct
acagttcccttttggaaagaggcatattactcactagtcttgttggagaagatactgcat
cagttccatgatttgttcttagcaaaggatcttgaggatatatgggaaatgatttcagag
cttctgttgcacccgcatatgtggttacgtgatgtatcgaaccgcctggtggccctatac
tttgcctcagtaactgaggccaacagagaaaaccatgaaaagtcactagaaacagttttt
ctaatgagaccaagtagacttattctcatagctgcatctctctgctgccaattgaaggcc
ccactaattgacaacactgccagcaccatagttacacaaaacctcagcttcacaatttgt
ggaatacattctttgttagtaccaaagaaatggattgatggccaaagttttgggtatacc
cttgaacacgatgaggaaggttgtttcctcaaagcttttcaaaagcttgactcacgaaaa
ggaagaagtatgtttgcatccctcacatctggtgataataatcaaaatgatcaagaaaat
agtggtcatcatcaatctttgctcgtctcttacctgctgaagagaatgggaaagattgcc
cttcagatggaggctgttcagatgaaaatcgttttcaatgttttcaagtcaatcacacca
aaaatcatcgacccggaaaagctttcatcacaaaccgattacttccagggttatgcgtat
caaatgctgttaccattgtacaaagtttgtgaaggatatgctggcaaagttattccagat
gatgcgaagcaattagcgcaagaggctcttcaaagtattagagatacattagggatgaat
aatttcatacaactttatagccagatcaggaaaaatctcaaggcaaagagggaaaaaagg
aaacagggagaaaagctgatggctgtggtcaatccaatgcgaaatgccaaaaggaagctg
agagttgcagctaagaatcgagccaacaagaaacgaaaaatagggacaatgaagatgacg
aaatggatgcgttga
DBGET
integrated database retrieval system
