Camellia sinensis (tea plant): 114289285
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Entry
114289285 CDS
T07364
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114289285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114289285
04121 Ubiquitin system [BR:
csin04121
]
114289285
03036 Chromosome and associated proteins [BR:
csin03036
]
114289285
03400 DNA repair and recombination proteins [BR:
csin03400
]
114289285
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114289285
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114289285
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114289285
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114289285
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-RING_UBOX
zf-HC5HC2H_2
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
Prok-RING_4
zf-RING_10
RTT107_BRCT_5
PHD_NSD
PTCB-BRCT
ADI
HisG_C
Motif
Other DBs
NCBI-GeneID:
114289285
NCBI-ProteinID:
XP_028088769
LinkDB
All DBs
Position
Unknown
AA seq
736 aa
AA seq
DB search
MADASNYARFLNPWVLHHQKLGLELKCPLCLNLLNRPTLLPCNHIFCDSCVPRLTHFGSE
CPVCKQQYSDRDVRPAPYMENLVAIYRSLEATFSASLFQSLTSDGFLILADAGRVPLQSP
ISLNTNVDNQSKESVETPQEGNSSNGQCISSLTANKRVRASLNHSVEEGNKLTGKSDKST
LLTTSNMEKFQKRDAGEVVFHGGDKLVSPHYFGWARGATNEELVTPEIDINQVLQLSPVS
PPSVDAKDVNDDSSDPGSRNDSTEKHPAKRSVENNSNDKAGGDRTSPSAGDHTRDVKRQK
KLNYGLFDMGVKIDGCTQPNVAVSKLESKFENLSGAKAPTISDLCDANKSICAFCQCSGL
TDRTGPMLHYVNGKEVAGDAATNTSAIHVHKICIEWTPQAYFVGETVKNLKAEVARASKL
KCSSCGLKGAALGCFVNSCRKSYHVPCAVEIIGCRWDFEDFLMLCPSHSSVKFPREKSKN
GKHASEKQHFVPTETTSKQSNFWGASPNGVKKWVFCGSALSAEEKYLLVKFANICGATVS
KFWKPNVTHVIAATDAKGACSRTLKVLKAILNGRWILKTDWIKACMEAMQPVDEEPYEVS
LDNHGCCDGPRTGRLRVLNNVPKLFNGLNFYFTGDFIPGYKDDLLDLVITAGGTVIESKE
QLVAQGQDTQTTSSGTLVVYNNDTMQGRRLEEEGSVVLQRLEVAERLGDEIGSQVIIAHT
WLLESIAASKLQPFGC
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcttccaactacgccagatttcttaacccatgggtcctccatcaccagaaa
ttgggtctcgagctcaagtgccctctctgcctcaacctgcttaatcgaccaaccttgctc
ccctgcaatcacatcttctgcgattcatgcgtaccgagattgacccattttggatccgag
tgccctgtctgtaaacaacagtactctgatcgagatgtaagaccagcaccttacatggaa
aatttggtagccatttatagaagtttggaggctactttcagcgccagtctctttcagtct
cttacttctgatggttttctaattcttgcagatgcgggaagggtgcctctgcaatccccc
atttcacttaacacaaatgttgataatcaatcaaaggaatcggttgaaacacctcaagag
ggaaactctagcaatgggcagtgcatctcttcattaacagctaataaacgagttcgggct
tcacttaaccactctgttgaagaagggaataagttgactgggaaatctgacaaatctaca
ctgctaaccactagtaacatggaaaaatttcagaagcgagatgcaggtgaagtggttttc
catggtggagataagttggtttctccacactattttggttgggcgagaggtgcaacaaat
gaagagcttgttacaccagaaatagatattaatcaagtgttacaattgtcaccagtcagc
cctccttccgttgatgccaaagacgtaaacgacgatagcagtgatccaggcagcagaaat
gatagtacagaaaaacatccagccaagagatcagttgaaaacaactctaatgataaggca
ggaggtgacagaacttcacctagtgctggagatcataccagggatgtcaaaagacaaaag
aaactgaactatggtttgtttgatatgggtgtgaaaattgatggttgcactcaaccaaat
gtagcagtttcaaaattggaatcaaaatttgaaaatctctctggtgcgaaggcacctaca
atttcagatttatgcgatgcaaataaaagtatttgtgccttttgccagtgctctgggctt
actgatagaactgggcctatgttgcattatgtcaatggaaaggaggttgcaggagatgca
gcaacaaacaccagtgctatacatgttcacaagatatgcattgaatggacacctcaagct
tattttgtcggtgaaacagttaaaaatttgaaggcagaagtggcaagagcatcaaagcta
aagtgttctagctgtgggctgaaaggagcagctcttggttgctttgtgaattcttgtcgc
aaaagttatcacgtgccttgtgcggttgaaatcattggatgcagatgggactttgaggac
tttctaatgctgtgcccaagtcattcctcagtcaagtttcctcgtgagaagtccaagaat
gggaagcatgccagtgaaaaacagcattttgtgccaacagaaacaacctcgaagcagtcc
aacttttggggagcctctcctaatggagtgaaaaaatgggttttttgtggatctgctctg
tctgctgaagaaaagtatcttttggtgaagtttgccaacatttgtggtgcaactgtgtcc
aagttttggaagccaaatgttactcatgtcattgctgccacagatgcgaagggtgcatgc
agcaggacgctgaaagttctcaaggcaattttgaatgggagatggatcctcaagacggac
tggataaaagcatgcatggaagctatgcaacctgtggatgaagaaccttatgaagttagt
ctagacaatcatggctgttgtgacggccccagaactggcagactaagggtcttaaataat
gtgccaaagctcttcaatggcttaaatttctacttcactggggacttcataccaggttat
aaggatgatcttctagatttggttatcactgcaggcggtactgtcatcgagagcaaggaa
cagttagtcgcacaaggtcaagatacccaaacaacttcttcaggaactctagttgtttat
aacaatgacaccatgcaagggcgcagattggaagaggaaggttctgttgtgttgcaaaga
ctagaagtagcagaaaggttgggtgatgaaattgggtctcaggtcatcatcgcacacaca
tggctgttggaatcaattgctgcaagtaagctgcagccttttggttgctaa
DBGET
integrated database retrieval system
