Camellia sinensis (tea plant): 114289530
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Entry
114289530 CDS
T07364
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b-like
KO
K11088
small nuclear ribonucleoprotein D3
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114289530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114289530
03041 Spliceosome [BR:
csin03041
]
114289530
03032 DNA replication proteins [BR:
csin03032
]
114289530
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
114289530
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
Sm proteins
114289530
U2 snRNP components
114289530
Complex B
U1 snRNP components
114289530
U4/U6.U5 tri-snRNP components
114289530
Complex C
U2 snRNP components
114289530
DNA replication proteins [BR:
csin03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
114289530
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
PT3
DUF6897
ADH_N
Motif
Other DBs
NCBI-GeneID:
114289530
NCBI-ProteinID:
XP_028089080
LinkDB
All DBs
Position
Unknown
AA seq
132 aa
AA seq
DB search
MSRSLGIPVKLLHEAAGHVVTVELKSGELYRGSMVECEDNWNCQLENITFTAKDGKVSQL
EHVFIRGSKVRFMVIPDMLKNAPMFKRLESRIKGKGSAIGVGRGRAVAMRARAQAAGRGA
PPGRGAVPSIRR
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggagcttgggaataccggtgaagcttctacacgaagcagctggacacgtggtg
accgtggaactgaagagtggagagctctacagaggtagcatggtcgaatgcgaagacaac
tggaattgccaactcgagaacatcactttcactgctaaggatgggaaggtttcacaactc
gagcatgtctttattcgaggcagcaaagtcaggtttatggtgattccagacatgcttaag
aatgctccaatgtttaagcgtttggagtctagaatcaagggtaagggctcagcaattgga
gttggccggggtcgtgctgttgcaatgcgggctagagctcaggctgctggtcgtggagct
ccacctggtaggggtgctgtaccctctataaggaggtaa
DBGET
integrated database retrieval system
