KEGG   Camellia sinensis (tea plant): 114290017
Entry
114290017         CDS       T07364                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114290017
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csin03021]
    114290017
Enzymes [BR:csin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114290017
Transcription machinery [BR:csin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114290017
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5
Other DBs
NCBI-GeneID: 114290017
NCBI-ProteinID: XP_028089686
LinkDB
Position
Unknown
AA seq 1947 aa
MEESPSSTVWGGKITGIKFGLATCQEICTSSNSDFPISHASQLSNPFLGLPLESGKCESC
GAAEPGTCEGHFGYIELPIPVYHPSHVSELKRLLSLVCFKCLKLRSGKFQVKNIGILERA
LTSCCEEAAQISIHEAKTDDGACYLELKLPSKSRYRDGCWNFLERYGYRYGDNYCRPLLA
SEVMIILKKLPSETKKKLAGKGYFPQDGYILQYLPVPPNCLSVPDVSDGITVMSSDLSIT
MLKKILKQVEIIKSSRSGTPNFESHEVEANDLQAAVAQYLQVRGTAKASRDMDTRFGINK
EQNDSTTKAWLEKMKTLFIRKGCGFSSRSVITGDAYKGVNEIGLPFEIAQRITFEERVTQ
YNMQYLQKLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRPPT
THKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHIFYPQSLAAKSEVLELFSVEK
QLLSSHSGNLNLQLATDSLLSLKILFKNYFLDRAAAQQLAMFVSNSLPQPALLKTYTSGP
HWTALQILQTALPRCFDCSGERHLVCKSEILSIDFSRDVMQSIINDIVSSICFEKGPDEV
LKFFNSLQPLLMENLFSEGFSVGLEDFSISRVVLENIQNGIQDISPLLYQLRLTYNELVE
LQLENHLRLLKVPVANFILKSSQMGNVIDSRSESAISKVVQQIGFLGLQLSDRGKFYSRS
LVGEMASLFQNKHPFRAKYPSEEYGLVTNCLFHGLDPYQEMVHSISAREVIVRSSRGLTE
PGTLFKNLMAILRDVVICYDDTVRNVCSNSVIQFDYGVKPGSKSAFAAGEPVGVLAATAM
SNPAYKAVLDSSPSSNNSWEMMKEILLCAVNFKNVLSDRRVILYLNDCDCGRKYCRENAA
YLVKNQLKKVSLKDIAVEFLIEFNGQQTMHGSSEFDANLLGHIHLNKELFQDLNISVQEV
CEKCQETIDRVRKKKKKVGYLFKRMKLSASEGCSFGHVCDIDTPCLTFFCQDANDLHLEK
TSKILADIICPVLLETIIKGDPRVCMANIIWISPDTTTWIRNPSKSQKGELALEVVLEKE
AVKQSGDAWRTVLDSCLPVIHLIDTNRSIPHAIKQVQELLGISCAFEQAVQRLSTSVSMV
AKGVLKEHLILLASSMTCAGNLIGFNSGGIKALSRSLNVQIPFTEATLFTPRKCFERAAE
KCHVDSLSSIVASCSWGKQVAVGTGSRFDVLWDTREVGMNQQDGIDVYNFLHLVRSSSKE
AETNSACLGAEIDYIELDSEMVDWDLSPEHSSCKPVFEDSSDFPDDLDNNQVVDGGWPSE
SKWEKVSSENTKSSGKEWDVGKRDNWGSGPTVSKPTGWSNWGAETVQSEDVEQVTQSKTS
VAWGSSSTEESKGHENESPANIWSSNKNNESNGSKVWAVEKKQNLGEDTMSKANGWGSSR
GGWGGNAVQTNDVPSSTAQKTETQSKASLTWGSSNSDALGKEFQSPSGKKKESPFNSWKS
SQIDDSGKGWGVERETSSKPSGWSTWGTNKVEIDEVPKIKAQETEWAAPSKTSLDWGSPS
GKQKESPFNSWKSSQNDDRHDVKEWGVEKKQNLGAEKTISKASGWSSQNDDCSSGKEWVL
DKKQNLGAEKEASGWSGWGANTAQTEDKLSTRPQEAEQLSQSKTSVAWGSGDEGPGTVEL
QSQTGQQKESAGNVWSPSQNGTNEQSNQSTSINGWDSANSGGTNASEKVQWGQARRFPAK
REQNTGEWRNKASANFTATRQRLDMFTSEEQDILLDVEPIMQSIRRIMHQTGYNDGDPLS
AEDQSYVLDNVFGHHPDKAAKMGAGIDYVMVCKHSSFQESRCFYIVSTDGNKVDFSYRKC
LENFIKGKYPDKAEAFNGKYFKKPQPRPASGSGPGWKRERSVAPEEASGSENRHRERSVA
PEEASGSENRDVERSVAAEAAGSENKQ
NT seq 5844 nt   +upstreamnt  +downstreamnt
atggaagaaagtccctcatcaacagtttggggtgggaagataactggaatcaagtttggt
ttggctacttgtcaggaaatttgcacatcatccaatagtgatttccctataagccatgct
agtcagctttcaaatccgttccttggtttgccgcttgaatctggaaaatgtgaatcatgt
ggtgctgcggaacccgggacatgcgaaggtcactttgggtatatagaattaccaattcca
gtatatcatccttcccatgtgagcgaactaaagcggttgttgagcctggtttgctttaag
tgcttgaagttgagaagtgggaagtttcaggtcaagaacattggtatacttgaaagggct
ttgacctcatgttgtgaggaggctgctcaaatttctatccacgaggctaaaacagatgat
ggagcatgttacttggagttgaaactaccatctaagtcgagataccgagatggctgctgg
aattttttagaaagatatggttacagatatggtgataactattgccgacctcttcttgct
tctgaggtgatgataattctgaaaaaattaccttctgagactaagaagaagcttgctggg
aaaggttacttccctcaagatggctatatcttgcaatatctaccagtccctccaaactgc
ttgtctgtgccagatgtgtctgatggaattactgtcatgtcttcggatctttctatcaca
atgcttaagaaaattctgaagcaagttgagattatcaaaagttctaggtctgggacacca
aattttgaatcacatgaagttgaagcgaatgatttgcaagcagcagttgcacagtacctt
caagtcaggggtactgccaaggcatctcgtgacatggatacacgatttgggattaacaaa
gagcaaaacgattctactactaaagcatggcttgagaagatgaaaaccctatttatcaga
aagggttgtggattctcctcacggagtgttattacaggtgatgcatataaaggagtcaat
gagattggactgccttttgaaattgctcaacggataacatttgaggagagagttactcaa
tataacatgcagtatctgcagaagctggttgatgaaaagttgtgtttaacctatagggat
ggtttgtcaacctactcgctgagggaaggttcgaaggggcatacttttttaagacctggt
caagtggtacatcgacggataatggatggggatattgttttcatcaatagacctccgaca
acgcataaacattccctgcaagctttgtcggtttatgttcacgatgaccatacagtcaag
atcaaccctcttatatgtgggccacttagtgctgattttgatggggactgtgtccatata
ttttatcctcaatccctcgctgccaaatcagaggttttggaactgttctctgtagagaaa
cagttgcttagttctcatagtggcaatctcaacttgcagctggccactgattcattgttg
tctctaaagattttgtttaagaactacttcttggatagagcagctgcccaacaattagcg
atgtttgtgtcaaattccttgccacaacctgctttattgaagacttatacatccggccct
cattggactgctttacagatactacagactgctctacctcgttgctttgactgtagtggg
gagagacatttagtttgtaaaagtgaaatattgagcatagattttagtagagatgtaatg
cagtcaattattaatgacattgttagctctatttgctttgagaagggcccggatgaggtt
ttgaagttctttaactctttacagcctttgctcatggaaaatttattttcagaaggtttc
agtgttggtttggaagatttttccatttctagagtggtcttagaaaatatccagaatggt
attcaggatatttcgccattgttgtatcagttgcggttgacttataatgaactggttgag
ttgcaattggagaatcatttgcggcttctaaaagttcctgttgctaatttcattctgaag
tcatcacaaatgggtaatgtaattgactccaggagtgaatcagccattagtaaagtggtt
caacaaattgggttcttggggttgcaactttcagatagggggaaattttactctaggtcc
ttggttggggagatggcttctcttttccagaacaagcatccttttcgtgctaaataccct
tctgaggaatatgggttggtgacaaactgcctcttccatggattggatccatatcaagag
atggttcattctatctctgccagagaagtaattgtccgttcatctagagggttgacggaa
ccaggaaccctattcaaaaatttaatggccatccttcgggatgttgttatctgttatgat
gacactgtgaggaatgtttgcagcaattcagttattcaatttgattatggggttaagcct
ggatctaagagtgcctttgctgctggtgaaccagttggtgtattggctgcaactgctatg
tcgaatcctgcatataaggcagttcttgattcctctccaagtagcaataactcatgggag
atgatgaaggagatactgctttgtgcagtcaatttcaagaatgttctttctgaccgccgg
gtaatattgtacttgaatgattgtgattgtgggagaaaatattgtagagaaaacgcagca
tatctggtgaagaatcagttgaaaaaagtcagcctaaaggatattgctgtggaattcttg
attgagtttaatgggcagcaaacaatgcatgggagttctgaatttgatgctaaccttctt
ggtcatattcatctcaataaggaactgttccaagacctgaacataagtgtgcaagaggtt
tgtgagaaatgccaagagactattgatagagtccggaaaaagaagaaaaaagttggttat
ctcttcaagagaatgaagttatctgctagtgagggttgttcttttggacatgtttgtgat
attgacacgccatgcttgacattcttttgccaagacgcaaatgatcttcatttagagaag
acttctaaaattcttgccgacataatttgcccggttttgttagaaacaattataaaaggt
gacccgcgggtttgcatggcaaacatcatttggattagtcctgacacaaccacttggata
agaaaccctagcaagagtcagaagggtgaattggctttggaagttgtcctggagaaagag
gctgttaagcagtctggggatgcttggaggaccgtcttggactcatgtcttcctgtcatt
catctgattgacacgaatcggtcaataccccatgcaataaagcaagttcaggaactgctc
ggaatttcttgcgctttcgagcaagctgttcagcgcctctcaacatcagtgtctatggtt
gcaaaaggtgtgcttaaagagcatcttattctcttggccagtagtatgacatgtgctggg
aatttgattggtttcaattctggtggtataaaagcattatctcgatcactaaatgtccaa
ataccgtttacagaggcgacattgtttacaccaagaaaatgctttgaaagggctgctgaa
aagtgtcatgtcgactctttgtctagcatagttgcctcctgttcttggggcaaacaagtt
gctgttggcacaggttctcgatttgatgtcctttgggacacgagagaggttggaatgaat
caacaggatggaattgatgtttataactttctgcatttggtgaggagcagttcaaaagaa
gcggaaacaaacagcgcttgtcttggtgctgaaattgattatattgaactggatagtgaa
atggtggattgggacctgtcaccagagcatagctcttgtaagcctgtctttgaagatagt
tctgactttccagatgacttagataataatcaagtggtggatgggggttggcctagtgaa
tctaagtgggagaaagtttcatctgaaaataccaagtccagtgggaaggagtgggatgtg
ggtaaaagagataattgggggtcagggcctacggtgtcaaaaccaactggttggtccaat
tggggggctgagacagtccagtcagaagatgtagaacaggtaactcagtcaaaaacttct
gttgcttggggttcttccagtactgaggagagtaaagggcatgagaatgagtcacctgcc
aatatttggagttctaataaaaacaatgagtccaatggtagcaaggtgtgggcagttgaa
aaaaaacagaatttgggggaggacacaatgtcaaaggccaatggttgggggtccagtaga
gggggttgggggggtaatgcagttcagacaaatgacgtgccttcttcaacagcacagaaa
acagaaactcagtcaaaagcttcccttacctggggctcttcaaatagtgatgctctgggt
aaagaatttcaatctccatcaggaaagaagaaagagtcacctttcaattcctggaagtcc
agtcaaattgacgactctggtaagggatggggggttgaaagagaaacaagctcaaagcca
agtggttggtccacttgggggactaataaagttgagatagacgaagtgcccaaaataaaa
gcacaggaaacagaatgggcagctccctcaaaaacttcccttgactggggctctccgtca
ggaaagcaaaaagagtcacctttcaattcttggaagtccagtcagaatgatgaccgtcat
gatgtcaaggaatggggggttgagaaaaaacaaaatttgggggctgaaaaaactatctca
aaggcaagtgggtggtccagtcagaatgatgactgcagttctgggaaggaatgggtgctt
gacaaaaaacaaaatttgggggctgaaaaagaggcaagtgggtggtctggttggggggcc
aatacagcgcagacagaggataaactctctaccagaccacaagaagcggaacagctatct
cagtccaaaacatctgttgcttggggttcaggggatgagggcccgggtacagttgaactg
caatctcagacaggacagcagaaagaatctgctggtaatgtctggagtcccagtcaaaat
ggaacaaatgaacagtcaaatcaatcaacaagcataaatggttgggattctgcaaatagt
ggtggtaccaatgcaagtgaaaaggttcagtggggtcaggcgagacggtttcctgctaag
agagagcagaatactggagaatggagaaacaaggcaagtgctaattttaccgcaaccaga
cagcgattggatatgttcacatcagaggaacaggacattcttttggatgttgaacctatt
atgcagtcgatcagaagaataatgcatcagactgggtacaatgatggggatccgttgtct
gctgaagatcagtcctatgtgcttgacaatgtgtttggtcaccatccagataaagctgca
aagatgggagctggaattgactatgtcatggtttgcaagcacagcagtttccaggaaagc
aggtgcttctacattgtatcaacggatggtaacaaggtagatttttcctaccgtaaatgt
ctagagaacttcatcaaagggaagtaccctgacaaggccgaagctttcaatggaaagtat
tttaagaaacctcaacctcgacctgcttctggttctggtcctggttggaagagggaacgg
agtgttgctcccgaggaagcttctggatctgaaaataggcacagggaacgtagtgttgct
ccagaggaagcttcgggatctgaaaatagggatgttgaacgtagtgttgctgcagaagct
gctggatctgaaaataagcagtag

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