Camellia sinensis (tea plant): 114290367
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Entry
114290367 CDS
T07364
Name
(RefSeq) CCR4-NOT transcription complex subunit 10-like
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114290367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114290367
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114290367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNOT10_TPR
TPR_2
TPR_1
TPR_12
ARM_TT21
TPR_8
SRP_TPR_like
Gag_p30
Motif
Other DBs
NCBI-GeneID:
114290367
NCBI-ProteinID:
XP_028090052
LinkDB
All DBs
Position
Unknown
AA seq
858 aa
AA seq
DB search
MDSKDSSSNSIVAASSAAAEDDGVLSATAGLAKDASVAFHSGKFLECVDLLNQLLQIKDD
DPKILHNIAIARYFQHGCSDPKKLLEVLNNVKKRSDELADASSENADAVGNLGNKIALGS
KGTNSVAHQFSSANSSHVYGDEFDTSLTMLNIAVIWFHLHEYAKAYSILDSLYQKIEPID
EATALHICLLFLDAALASHDPWKFVDVINYVEKAYCFSNLISQSDNGSSTTQQSSNLVVK
SSSLPSNSNATDVSNSDSVANSNSSESPFSRTLSEENLESLISSIDMSGQNLARPSGVST
NDLSRTPADHSISTSDLRLKLQLYRVRLLLLTRNLKAAKREVKMAMAMNVARGKDSSMAL
LLKSQLEYARGNYRKAIKLLMASSNRTEIGISSIYNNNLGCIYYRLGKYHTSTIFFSKAL
SNSSSLRKEKPLKLSTFSQDKSLQIIYNCGVQYLACGKPILAARCFHKASLIFYNRPLLW
FRIAECCLMALEKGLLKSGPAQLNGSDVKVHVVGMGKWRQLAVEDGVSRNGKVDFVGTDD
CFLGDDKQPNLSLSLARQSLFNALYLLNRSESKCSNSDSPHSSTLEENESGEVTSSNNTN
YRSGSGGDPKASNLMVGTGQINGNGDAKEQKGGNGNGLNAALPSSISDYEEICERENLMI
KQALLADLAYVELELGNPLKALSTARCLLELPECSRIYIFLGNVYAAESLCLLNRPKEAA
EQLLIYLSGDNNIELPYSKEDCEQWRVIKNLDCEELNGGFSKNSSLDESQDVMFLNPEEA
RGALYANQAAIFALQGELEQAHRSVFQALLSIPDSPEAIVTAIYVDLMIGKTQEALAKLK
QCSRVRFLSGSSMLKNAC
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggattcgaaggattcttcgtcgaattcaattgttgcggcgtcgtcggcggcggcagaa
gacgatggagttttgtcagctaccgcggggctcgcgaaggacgccagtgtagcctttcat
tcgggcaagttcttggaatgcgtcgatttgttgaatcagctcttgcagataaaagatgac
gatccaaagattcttcacaatattgctattgcaaggtactttcaacacggttgttcagat
cccaagaagttacttgaagttcttaataatgtcaagaaacgaagtgatgagcttgctgat
gcatccagcgaaaatgcagatgcggttggcaatttgggcaacaaaattgcattgggatct
aaaggaaccaatagtgtggcacatcaattttccagtgcaaatagttcacatgtttatggc
gatgaatttgacacttctctgacaatgttaaatatagcagttatctggtttcatcttcat
gaatatgcgaaggcctattccattcttgattctttatatcaaaagattgaaccaatagat
gaggcaacagctcttcatatttgccttttgttcctggatgctgcattagcttcccatgat
ccgtggaaatttgttgatgtaattaattatgtggagaaagcttattgtttcagtaatttg
atcagtcaaagtgacaatggaagctccacgacacaacaatcttctaacctggtggtgaaa
tcttcttcgcttccaagcaattcaaacgccacggatgtttctaattctgattcagttgct
aattcaaattcctcagaaagtcctttttctagaactttatcagaggaaaatctcgaaagc
ctaatttcaagtatcgacatgagtggacagaacctagcaagaccatcaggcgtatcgacc
aatgatctttcaagaactccagctgatcattcaatttcaaccagtgatctgagattgaag
ttgcaactttacagggttcggcttttgcttctcactaggaacctcaaggcagcaaagcgt
gaagttaagatggctatggctatgaacgtagcacgggggaaagattcttccatggctctc
ctcttgaagtcccagcttgagtatgcacgtggaaattaccgtaaagccatcaagctcttg
atggcatcgagtaatcggacagaaatagggatttcaagcatatacaacaacaatttgggg
tgcatctattatcgactcggaaaatatcatacgtcaacaatcttcttttccaaggctttg
agtaatagttcatctcttcggaaggaaaaaccattaaagctctcgactttctcacaggac
aaatcactccaaattatatacaactgtggtgttcagtacttggcttgtgggaaaccaata
cttgccgctcgttgtttccacaaggcgagtttaattttctacaaccggcctctcctgtgg
ttccgaatcgctgaatgttgtctaatggcactagagaagggacttttgaaatccggtcca
gcccaattgaatggatctgatgttaaagttcacgtggtcggaatgggaaaatggagacaa
cttgctgtggaagatggggtttcgcgtaatgggaaggtggattttgttggaacagacgat
tgctttttgggtgatgataaacagcctaatctctcgctgtcacttgcccggcagtctctg
ttcaatgccctgtacttgttgaaccgttctgagtcgaagtgttcaaattctgattcccct
catagttccaccttggaggaaaacgaatcaggagaggtcacatcgtcgaataatactaat
tacagaagtgggtctggtggtgatcccaaggcatctaatctgatggtcggcacgggtcaa
atcaatggaaacggggatgctaaagaacagaagggtggaaatggaaacggtctgaatgcc
gctttaccgagctcgatatcggattatgaagagatttgtgaaagagagaatctgatgatc
aagcaagctcttcttgctgacttggcatacgttgagttggaattaggaaatcctttgaag
gcactgtcaacggcacgatgtctcttagaacttccagaatgttctagaatatacattttt
ctaggcaacgtgtatgcagccgagtctctctgcttgctaaaccggccaaaggaagccgct
gagcaattgttgatctatttgtccggtgataacaacattgaattaccgtacagcaaagag
gactgcgaacaatggcgagtaattaaaaacttggattgtgaggagttgaatggcgggttt
tcaaagaactcttcgcttgatgaatcacaagatgtcatgtttctcaaccccgaagaggca
cgtggagctctttatgcaaaccaagctgcaatttttgctttgcagggagagctcgagcag
gctcatcggtctgtgtttcaagctttattgtcaatacccgatagcccagaagcaattgtt
actgccatttacgtggatctcatgattgggaagacacaagaagcgctcgcgaagttgaaa
cagtgtagtcgcgttaggtttctctcgggaagttcaatgctaaaaaacgcttgttga
DBGET
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