Camellia sinensis (tea plant): 114290725
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Entry
114290725 CDS
T07364
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114290725
09123 Folding, sorting and degradation
03018 RNA degradation
114290725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114290725
03041 Spliceosome [BR:
csin03041
]
114290725
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114290725
mRNA degradation factors
5'-3' decay
Lsm complex
114290725
Spliceosome [BR:
csin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
114290725
Complex C
U2 snRNP components
114290725
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
RimP_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
114290725
NCBI-ProteinID:
XP_028090491
LinkDB
All DBs
Position
Unknown
AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttctcgtattttaaggacctagtgggcagagaagtgacagtggaactgaag
aacgatctagccattcggggcactctgcattcggttgatcagtatctcaacattaagctt
gagaacaccagggttgtggatcaggacaagtatccccacatgctctcagtgaggaactgt
ttcatcagaggatcagtggttaggtacgttcagttaccaccagatggagttgacattgaa
ctgcttcatgatgctacaagaagagaagctcgtggtggctga
DBGET
integrated database retrieval system