Camellia sinensis (tea plant): 114292154 Help Entry 114292154         CDS       T07364                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism csin  Camellia sinensis (tea plant) Pathway csin03030   DNA replication csin03410   Base excision repair csin03420   Nucleotide excision repair csin03430   Mismatch repair Brite KEGG Orthology (KO) [BR:csin00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     114292154    03410 Base excision repair     114292154    03420 Nucleotide excision repair     114292154    03430 Mismatch repair     114292154  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:csin03032]     114292154    03400 DNA repair and recombination proteins [BR:csin03400]     114292154 Enzymes [BR:csin01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      114292154     6.5.1.6  DNA ligase (ATP or NAD+)      114292154     6.5.1.7  DNA ligase (ATP, ADP or GTP)      114292154 DNA replication proteins [BR:csin03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     114292154  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      114292154 DNA repair and recombination proteins [BR:csin03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      114292154    NER (nucleotide excision repair)     Other NER factors      114292154    MMR (mismatch excision repair)     Other MMR factors      114292154 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase mRNA_cap_enzyme Motif Other DBs NCBI-GeneID:  114292154 NCBI-ProteinID:  XP_028091861 LinkDB All DBs Position Unknown AA seq 799 aa AA seqDB search MFSLRSCCVTHTILSHRLTLRTSLILPPLFLSLFPPKPISLQPLYSPNPNPNPRTMSSRP SAFDALMSGARAAASKKKPPTSSSPKKRKNPEPKTPLQNPTHPQAPIDEEAPPSNSKSNS NSKPFEEPQVSNGSEKDHPDTDPKPSVDTLAVKKPRLINADDSIALLKKKPANFDPKSAA FWNDGERVPFMFLVKVFDAIDKESGRIAITEIVCNMLRTVISTTPDDLLPVVYLLANKIA PAHEGVELGIGDASIIKALAEACGAKESQIKSKYQALGDLGLVAKASRSSQSLMRRPEPL TVAKVFGTFRLIAKESGKDSQEKKKNHIKGLLVAATDCEPQYLIRLLQSKLRIGLAEQTL LAALGQAAVYAEKDSSPPAHIDSPFEEAAKIVKQVYSVIPVYDKIVPALITGSLWNLSKT CSFTPGVPIGPMLSKPTKGVSEILDKFQDMEFTCEYKYDGERAQIHFLENGSVEIYSRNA ERNTGKFPDVVVAVSRLKKPSITSFVLDCELVAYDREKRKILPFQTLTTRARKNVAMSDI KVEVCIFAFDILYLNGQQLMQEQLNVRREHLYKSFEEDPGYFQFATAIISNDLEEIQKFL EIAVDSSCEGLIIKTLSKDATYEPSKRSNNWLKLKKDYMESIGDSLDLVPIGAFHGRGKR TGVYGAFLLACYDGSNEEYQSICKIGRLFVCFGAIKIVSKVIPKPKPYYRYGDSLKPDVW FEPTEVWEVKAADLTISPVHRAAIGIVDPDKGISLRFPRLVRVREDKPPEQASSSEMVAE MYSSQKNNQRNNQDDNEED NT seq 2400 nt NT seq  +upstreamnt  +downstreamnt atgttctctttgcggtcttgctgtgtaactcacaccattctctctcatcgtctcactctc cgaactagtctcattctccctcctctcttcctctctctcttccctcccaaacccatctcc ctccaacccctctactctcctaaccctaaccctaatcccagaaccatgtcctctcgcccc tccgctttcgatgctctcatgtccggtgcccgagccgctgcttccaagaagaaaccccca acttcttcttcccccaagaaacgcaaaaacccagaaccaaaaactccccttcaaaaccct actcatccccaagccccaatcgacgaagaagccccaccttccaattccaagtccaattcc aattcgaagccgtttgaagaaccccaagtctcaaatgggtccgagaaagatcatccagac actgatccaaagccctcggtggatacattggcggtgaagaaaccgcgtttgatcaatgct gatgacagtattgctctgctgaagaagaagcctgcgaattttgaccccaaatcggctgct ttttggaacgatggcgagagagtgccgtttatgtttcttgttaaggtgtttgatgcgata gataaggagtcgggtcggattgcgattacggaaatcgtgtgtaatatgttgaggactgtc atttcgactactcccgatgacttgcttccggttgtttatcttttggcgaacaagattgca ccggcacatgaaggggtggagcttggaattggagatgcttcgattattaaggcacttgcc gaagcttgtggggcaaaagaatcgcagattaagagcaaatatcaggcattaggagacttg ggccttgttgcaaaagcaagtcgttcatcccaatctttgatgcgtagaccggaaccatta acagttgccaaggtttttggtacatttcggcttattgccaaggaatctggcaaggatagc caagagaagaagaaaaaccacatcaagggacttcttgttgcagccactgattgtgaacca caatatctgattcgtttacttcagtcaaaattgcggattggtttggcagagcaaaccctc ttagctgcactggggcaagctgctgtgtatgctgaaaaagattcgtcaccacctgcacat attgattctccttttgaagaggctgcaaaaattgtgaagcaagtttattctgtaattccc gtgtatgacaaaatagtccctgctctaataactggcagcttgtggaacctttcaaagaca tgtagtttcacacccggtgtcccaattgggcctatgttatcaaaaccaaccaaaggagtt tccgagatcttggataaatttcaggatatggagttcacctgtgaatacaagtatgatggt gaacgtgctcagatacatttcctcgagaatggttcagttgagatatatagtcgaaatgct gagcggaatactggaaagtttcctgatgttgttgttgcagtttcaagattaaagaaacca tccataacatcatttgttctggattgcgaacttgtggcttatgaccgggagaaacgtaaa atcttgcccttccagacactcactactcgtgctcgtaaaaatgtggcgatgagtgacatc aaagttgaagtttgcatatttgcttttgacatcttgtatcttaatggccaacaacttatg caggagcaacttaatgttcgtagagagcatctttacaagtcatttgaggaagaccctgga tattttcagtttgcaacagcaataatatcaaatgatcttgaggaaatacaaaagttcctt gaaattgctgttgattctagttgtgagggtttgattatcaaaacactgagtaaagatgcc acatatgagccctcaaaaaggtcaaataactggctaaaattgaagaaagactacatggag agtattggtgactcgctagatttagttcctattggtgcttttcatggcaggggcaaacgt actggtgtttacggtgcctttttgcttgcttgctatgatggcagcaatgaagaatatcaa agcatctgtaaaattggtaggctttttgtttgctttggtgctataaaaattgtgtctaaa gtgattcccaaaccaaagccatactatcgatatggagattcattaaaaccagatgtctgg tttgaacccactgaggtgtgggaggtgaaagctgcagacttgaccatcagtccggtacat cgtgctgccattggcattgtggatcctgataagggcatttctcttcgatttccccgtctg gttcgtgtccgagaagacaagcctccagagcaggcatcgtcatctgagatggtcgctgag atgtatagctcccagaaaaacaatcaaaggaataatcaagatgataatgaggaagactga

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