KEGG   Camellia sinensis (tea plant): 114292333
Entry
114292333         CDS       T07364                                 
Name
(RefSeq) UBP1-associated protein 2C-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114292333
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114292333
   03041 Spliceosome [BR:csin03041]
    114292333
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     114292333
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     114292333
Spliceosome [BR:csin03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    114292333
SSDB
Motif
Pfam: RRM_1 RRM_7 NMB0537_N
Other DBs
NCBI-GeneID: 114292333
NCBI-ProteinID: XP_028092074
LinkDB
Position
Unknown
AA seq 434 aa
MELSKKRKADENGGAFAATDGGAPPLLSPDDARKILEPFTREQLLDILHPALLRHLDVLS
SVRSIADSDPSRRKLFVRGLGWETTTDKLRTLFSSFGDIDEAIVITDKATGKSKGYGFVT
FKHIDGAIVALKEPSKKIDGRMTVTQFAAAGISGSTAASGGGGGGGGGGVDVSLRKIYVG
NVPFEISSERLLGHFSAYGEIEEGPLGFDKQTGKPKGFAFFVYKTEEGARASLVDPMKNI
DGHQVMCKLAVDGKKGKPGGGGGAPNATGVSGDIGSGVPPTGSMPGSMMNSNYGVGPGGY
GGFSGGPTGLPHQNPHLNSPLPSSIGAQGFGNQGPSSFGSGSGGYGVGLGGGGGGGYGGS
QYGGSGSGEYGVLNNAGSSMYRLPPSSVGMPSGGYPESGNYGLSSSAFPTQMHQPSSGSR
VPPSGMYQGMPPYY
NT seq 1305 nt   +upstreamnt  +downstreamnt
atggaactttcgaagaagcgcaaagccgacgagaacggtggcgcattcgccgccacagac
ggcggcgctccgccactcctctctcccgacgacgcccgcaaaatcctggaacccttcacc
cgggaacaacttctcgacatcctccaccccgctctcctccgccacctcgacgtcctctcc
tccgtccgatcaatcgccgactccgacccctcccgccgcaagctcttcgttcgcggcctc
ggttgggaaaccaccaccgacaaactccgcaccctcttctcctccttcggtgacatcgac
gaagccatcgtcatcactgacaaagccaccggaaagtccaaaggctacggctttgtcaca
ttcaagcacatcgacggcgcaatcgtcgccctcaaagaacccagcaaaaaaatcgacggt
cgaatgacggtcacccagttcgccgccgctggaatttccggttccacggcagcgagcggc
ggcggaggaggcggcggcggcggtggtgttgatgtttcgttgagaaagatttatgttggg
aatgttccgtttgagatttcttcggagagattgttagggcatttttcggcgtatggtgag
attgaggaagggcctttagggtttgataagcagacagggaagccaaagggttttgctttt
tttgtttacaagactgaggagggtgctagggcttcacttgtggatccaatgaagaacatt
gatgggcaccaagtgatgtgtaaattggctgttgatgggaaaaagggaaaacctggtggt
ggtggtggtgctccgaatgcgactggagtgagtggtgatatagggtctggcgttcctcca
actgggtcgatgccgggttcgatgatgaattcgaactatggtgtcggccccggtggatat
ggagggttctctggtgggccaacagggttgccccatcaaaatcctcacttgaattcgcca
ttaccttcgtcgattggtgctcaggggtttgggaatcaaggaccatcttcgtttggtagt
ggtagtggtgggtatggagtgggtttgggtggtggtggtggtggtggatatggtggttca
cagtatggggggtctggttcgggtgagtatggtgtattgaacaatgcgggttcttctatg
tataggttgccaccaagttctgttggaatgccttctggaggatacccagagagtggaaat
tatgggttgtcttcttctgcatttccaacacaaatgcaccaaccgtcgtcgggttctagg
gttcctcctagtggaatgtaccagggcatgccaccctattactga

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