KEGG   Camellia sinensis (tea plant): 114292689
Entry
114292689         CDS       T07364                                 
Name
(RefSeq) protein pleiotropic regulatory locus 1
  KO
K12862  pleiotropic regulator 1
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114292689
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:csin03041]
    114292689
   03400 DNA repair and recombination proteins [BR:csin03400]
    114292689
Spliceosome [BR:csin03041]
 Complex B
  Other components
   Prp19 complex
    114292689
 Complex C
   Prp19-CDC5 complex
    114292689
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    114292689
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_NOL10_N Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_EIPR1 WD40_RFWD3 NBCH_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st CFAP251_N Beta-prop_DCAF4 ANAPC4_WD40 Beta-prop_Aladin ASA1 Beta-prop_RIG_2nd PAC11 Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_ACSF4 Beta-prop_DCAF12 TRM82_WD WDR90_beta-prop_4th DNAI3_WD Beta-prop_WDR19_1st Beta-prop_WDR11_2nd WDR54
Other DBs
NCBI-GeneID: 114292689
NCBI-ProteinID: XP_028092506
LinkDB
Position
Unknown
AA seq 481 aa
MPGPTMEMEPVEPQSLKKLSFKSLKRALDLFSPLHSHFPPPDPESKKIRTSHKFNAEYGG
LKSPSSQPPSHGKSDESQQASGPSNALALPGLENSKDARNGGAQTDLIVGTTAQPKLDVG
FSGKSTAVVSAGGSSERNLSTSAIMERIPSRWPRPVWHAPWKNYRVISGHLGWVRSIAFD
PSNTWFCTGSADRTIKIWDVGSGRLKLTLTGHIEQVRGLAVSNKHTYMFSAGDDKQVKCW
DLEQNKVIRSYHGHLSGVYCLAVHPTIDILLTGGRDSVCRVWDIRSKMQIHALSGHENTV
CSVFTRPTDPQVVTGSHDTTIKFWDLRFGKTMTTLTHHKKSVRAMALHPKENCFASASAD
NIKKFNLPKGEFMHNMLSQQKTIINAMAVNEDGVMATGGDNGSLWFWDWKSGHNFQQSQT
IVQPGSLDSEAGIYALSYDVTGSRLVTCEADKTIKMWKEDENATPETHPLHFKPPKDIRR
F
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgccaggaccaacaatggagatggagccagtggagccacagtcactgaagaagctcagt
ttcaaatccctaaagcgcgctctcgatctcttctctcctctccattctcactttcctcct
cctgaccccgagagtaagaagataaggacgagccataagtttaatgctgagtatggaggg
ctaaagagcccaagtagtcagcctcccagtcatggcaagtcagatgaatcccaacaagct
tccggtccttcaaatgctctagcccttccaggtctcgaaaattccaaggatgcacgtaat
ggaggggctcaaactgatttaattgttggaacaactgcacaaccaaaacttgatgttggt
ttttccgggaaaagcactgctgttgtttctgctggtggttcatctgaaaggaacctctca
acttcagccattatggaaagaattccaagcagatggccacgtcctgtatggcatgcacca
tggaagaactacagggtgattagtggccatttgggttgggtgagatctattgcatttgat
ccaagtaatacatggttctgtactggctctgcagatcgcactatcaagatatgggatgta
ggaagtggaaggcttaagctcacacttaccgggcacattgaacaagtacgagggcttgcc
gtcagcaataaacacacatatatgttctctgctggtgatgacaaacaagttaaatgctgg
gaccttgagcagaacaaggttatccgttcttatcatggtcatctaagtggagtttattgc
ttggctgttcatccgactattgacattctgctcactgggggtcgtgactctgtctgccgt
gtctgggatatccgtagcaagatgcaaattcatgcactgtctgggcatgagaacaccgtt
tgctcagtttttactcgacctacggatccacaagttgtaactggttctcatgatacaacg
ataaagttctgggatcttagatttggtaaaacgatgacaacccttacacaccataagaaa
tctgtgcgagcaatggctttacaccccaaagagaattgttttgcatctgcatcagctgac
aacataaaaaaattcaaccttccaaaaggagaatttatgcacaacatgctttctcagcag
aaaaccatcatcaatgcaatggcagtcaatgaagacggtgtaatggctacaggaggtgac
aacggaagtttatggttctgggactggaagagtggtcataatttccagcaatcccaaaca
attgtacagcctgggtcgttggatagcgaagctggtatctatgctctctcatatgatgtt
actggttcaaggttagtcacttgtgaagcggacaagaccataaagatgtggaaagaggat
gaaaatgccacccctgaaactcatcctctccacttcaagccgcctaaagatatccggagg
ttttaa

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