Camellia sinensis (tea plant): 114293476
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Entry
114293476 CDS
T07364
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114293476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114293476
Spliceosome [BR:
csin03041
]
Complex A
Other components
Complex A specific factors
114293476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
RRM_1
SF1-HH
KH_1
RRM_5
KH_12
RRM_10
RBD_DEAH11
PHD_4
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
114293476
NCBI-ProteinID:
XP_028093354
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MTGDVKLHIIQKQKRTTALKRRNQRMTEELEEEPIEDPDEDPEEDPEEDPEEEPEEDPEV
GPEEDPEEELSVGPDEESDEETSKCVSPVMSYWKYDESKQPVEDPDGNAAKDFAPELSSQ
NDACGTYHQSGSNHNYSEEKKRSLNATTSDSDPLQVYQSQKKFRQEDAFKAKLDVGTIVT
DFHGKSVVSEAILNDESVAKLQEHSGSSGKRRRSRWEPQPEQEGETGEGNVASKRRKTRW
ASDVSQLKMLGPIQLPDFMEGFVGSGLDPKIQKLKLSLSELNSKLLSSDFHDDRPEEERS
PSPQPVYNNLGIRINTRQMRVREKLIKQRQKIISKLVKKNPTFKILPDYKPPKLFKKLYI
PVKEYPTYNFVGLIIGPRGNTQKRMEKETGARILLRGKGSVKAPQKPDTSSDDEDLHVCI
EADNQKSLDAAVRMVEKLLIPIDEGMNGHKQAQLVELAKLKGTYRNENICSVCKEEGHKH
YACPLRQSTFKMEITCAMCGSFCHPTSSCPFITSPQVGTTLCSTGRGSGSVPNTKRKPNK
EINDASLYVGYLPQAVDDNQLRELFCSFGKITEVKVIKDRSTGFSKGYGFVTFESPIDAA
MAVTHMNGHKMEGKMLAVRVAGRPPPAGLSIMSQLPIYPGPAAISASVPSQTAWPGPPGS
MLPEARATFPNSEDLGLPSSSISLGQGNHLPAREAVNIFPSVVSGNMGSKLSTRFDSFYG
YPNQIPFSSPGLMSQFPAAPDYPPGSQLPSYFATPVQKPSSYHFSKTPESI
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgacaggtgacgtaaagcttcatataattcaaaaacaaaagagaactacagctttgaag
cgaaggaatcaaaggatgactgaggaactggaggaagaaccaatagaggaccctgatgaa
gatcctgaagaggatcctgaagaggatccagaagaggaacctgaagaagatccagaagtg
ggccctgaagaagatccagaagaggaattaagtgttggaccagatgaagagtcagatgag
gaaacttcaaagtgtgtttctccagtaatgtcttactggaaatatgatgagtccaaacaa
ccagttgaggatccagatgggaatgctgcaaaagattttgctcctgagctgtcttctcag
aatgacgcttgtggaacttatcaccaatcaggatctaatcacaactattcagaagaaaag
aagagatcgttgaatgcaacaacatctgattcagatccgttgcaagtttatcagtcacaa
aagaagttcagacaggaggatgcatttaaagcaaaattagatgttgggaccattgttaca
gatttccatggtaaatctgtagtttctgaggctattttgaatgatgaaagtgttgctaaa
ctacaggagcatagtggaagttctggaaaacgaaggcgtagtagatgggaacctcagcct
gaacaagaaggggaaactggggaaggcaacgtggctagtaaaagaaggaaaaccaggtgg
gctagtgatgtctcacagttaaaaatgcttggcccaattcaacttccagacttcatggaa
ggctttgttggatctgggttagatccaaagattcagaagttgaaattaagcctgtcagag
ctaaacagtaagctgcttagttcagattttcatgatgacaggcctgaggaggaaagatct
ccttctccccaaccagtgtacaacaatcttggtataagaataaatacaaggcagatgagg
gttcgtgagaaactaataaaacaacgccaaaaaatcatttcaaagttggttaagaagaat
ccaaccttcaaaattcttcctgattacaagccaccaaagctctttaaaaaactatacata
ccggtgaaagaatatcctacatataattttgttggccttataattggcccaaggggaaac
acacaaaagagaatggagaaggaaactggagctaggattctactgcggggtaaaggctct
gtgaaagcaccacagaaacctgatacctcttctgatgatgaagacttgcatgtttgtata
gaggcagataaccagaagtctctggatgcagctgtaagaatggttgagaaattgctaatc
ccaatagatgaaggaatgaatggacacaagcaagcccaactggtggagcttgcaaaactg
aaaggaacttatagaaatgagaacatctgcagtgtgtgcaaggaggaaggacacaagcac
tatgcctgtcccctccggcaatctacttttaaaatggagatcacctgtgcaatgtgtgga
agcttttgccatcccacatctagttgtccctttattacatcacctcaggttggcaccact
ttgtgcagtactgggcgtggcagtggttcagttcctaacacaaaaaggaaacccaacaaa
gaaatcaatgatgcaagcctctatgttggctatcttcctcaagctgttgatgacaaccag
ttgagagagctgttttgttcattcggtaaaatcacagaagtgaaagtaattaaagatcga
agcacaggtttcagtaaaggctacggctttgttacatttgaaagtcccattgatgctgcc
atggctgtgacacatatgaatgggcacaaaatggaagggaagatgctagcagtaagggtg
gctggccggccaccacctgcaggattgtcaatcatgagccaacttccaatataccctgga
cctgcagctatttctgctagtgtcccaagccagacagcttggcctggcccacctggatcg
atgctgcctgaagctcgagctacctttccaaatagtgaggacttgggtttgccttcatcc
tctatctcattgggacaaggtaatcaccttcctgcaagggaggccgtaaatatctttccg
tctgttgtctcaggcaacatgggttcaaaactgtctaccaggtttgattcgttttatgga
tatcctaaccaaatcccattctcatcccctggattgatgtcacaatttcctgctgctcca
gattatcctcctgggtcccaattgccatcatattttgctacaccagtacagaaaccatct
tcataccatttcagtaagacacctgaaagtatctga
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