Camellia sinensis (tea plant): 114294683
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Entry
114294683 CDS
T07364
Name
(RefSeq) pre-mRNA-processing protein 40A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114294683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114294683
Spliceosome [BR:
csin03041
]
Complex A
U1 snRNP components
U1 related factors
114294683
Complex B
114294683
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
FF_RHG35_4th
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
114294683
NCBI-ProteinID:
XP_028094626
LinkDB
All DBs
Position
Unknown
AA seq
1016 aa
AA seq
DB search
MANNAQFPGMQFPPVVPVPVVPAPQSQPYNPVSSQQFQQVGRTNIGLSSHSQHFQFSQPV
QQLPARPGLQPPQAIMIPEVQANRPSIPVSPQPPQNAQIPNNYVPGLSGPRMPLSSSYTF
STSSGGQPQRNADALSQYQPISQTNVSNFAVGGQPWLLTGSQTTTSVVSVQQIGEQSSAT
ATVVPAAIVEPSLNEKLPSDWLEHTSGAGKKYAGKKYYFNKKTKLSTWEKPSELMTPIER
ADASTDWREYRSPEGRKFIIPRYYYNKITKQSKWKIPDELKLAREQMKMASSKETQAGKD
NSPVPAAAVHSMVKSPPPNAVTSSSSDHGVVSSPIQVATVSTVVNPQPVSTSEQLPLPVV
PSTVTTNVIEVQTPVETITPITAVSGGAESFSTSVTTVMAQMSNDNNNAAQDVVNTVDGV
SPGVAEEAEKGKGSAGKVNVTASGEKTVVQEPLVYENKLEARNAFKALLESANVGSDWTW
DQAMRVTINDQRYGALRTLGERKQAFSEFLIQRKKQDAEERRARQKKAQEEFRTMLEECK
ELTSTTRWSKAIAIIEDDERFKAVERAKDREDVFEDYIVELEKKERAKALEEHKRNRMEY
LNFLKSCDFITASSQWRKVQDRLEDDERCSRLEKIDRLEIFQEHLRDLEREEEEQMKLRM
EELRKAERKNRDEFRKLMEGHVAAGILTAETHWRDYCTKVKDLPAYLAVSSNASGSTAKD
LFEDVAEELQKQYLDDKARIKDAMKFRKIALSSTWTLEDFKSAINEHISSPQLADINLKL
VFDELLERVKEKEEKEAKRRKRLADDFYDLLCNSKDVTASSKWEDCKQLVEDRQESWFNV
EESFFREIFEKYITELKEKAKEKERKRRDDKAKRDRDAKDREKKKKEKQIREKGRGFESK
NGKDGTHSDNAEKIESYGLEENRRSGKDKDKKHRKRHRHSVDDLSVDENEKDRSKDSHRH
SSDWKKSKQMEQRSTSELDSESRHKRHKKDHRDGSHRNADYEEVKNRQFGEDGEVW
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atggccaataatgctcaatttcctggcatgcagttcccacctgtggttccagtacctgtg
gtaccagcaccacaatcacagccttacaatccagtgtcttctcaacaatttcagcaggtt
ggccgcacaaacattgggttgtcttctcacagtcaacactttcaattttctcaaccagtg
cagcaactacctgcaagaccgggtctgcagccaccacaggcaataatgatcccagaagtt
caggcaaacaggccaagtatacctgtatcaccacaacccccacaaaatgctcagattccc
aataattatgtgcctggtttaagtggcccacgaatgcctctctcttcatcgtatactttt
agcacttcatctggaggccaaccacaaagaaatgctgatgctttgtcccagtatcagcca
atatcccagacaaatgtgtctaattttgctgttgggggacaaccttggctgctgactgga
agccagaccacaacctcagttgtatctgtgcagcagattggtgaacaatcttcagctaca
gctacagttgttccagcagcaattgtggagcctagccttaatgaaaagcttccatcagat
tggttggagcatacttctggtgctggaaaaaagtatgctggaaaaaaatattatttcaac
aaaaaaacaaaattatctacctgggagaagccttcagaattaatgacaccaattgagagg
gcagatgcatccactgattggagggaatataggagtcccgagggaagaaaatttatcatt
cccaggtattattacaacaagattaccaagcaatcgaaatggaaaatccctgatgaactc
aagttggctcgtgaacaaatgaaaatggcatctagtaaagaaacacaggcagggaaggat
aattctcctgtccctgctgctgctgttcactctatggtcaaatcaccaccccccaatgca
gttacctcatcttcctcagatcatggcgtagtgtcaagcccaattcaagtggcaactgtt
tctactgttgtgaatccacagcctgtgtcaacttctgagcaattgcccttgcctgttgta
ccttctacagtaacaacaaatgtaattgaagtccagacacctgtggaaaccatcacacca
atcactgctgtttcagggggtgccgaatcgttcagcacttcggtcactacagtcatggca
caaatgagtaatgacaataacaatgcagctcaggatgttgtaaatactgttgatggagtt
tccccaggggttgctgaggaagctgagaaaggcaagggaagtgctgggaaagtcaatgtt
actgcctcaggagagaaaacagttgttcaggagcctttggtctacgaaaataaattggag
gcaagaaatgcatttaaagcacttctggaatctgcaaatgttgggtctgattggacctgg
gatcaggctatgagagtaacaattaatgaccaaaggtatggtgcactgagaactcttgga
gagcggaagcaagcattttctgagttcttgatacaaaggaaaaaacaggatgctgaagag
aggcgtgctagacagaaaaaggcacaggaagagttcaggacaatgttagaagagtgtaaa
gagttgacgtcaaccacgagatggagcaaagcaatagctataatcgaagatgacgaacgt
ttcaaagctgtagaacgagctaaagaccgagaagatgtttttgaagactatatagtggaa
ctcgagaaaaaggaaagggcaaaggcattggaggagcataagcggaatagaatggaatac
ttaaacttcttgaagtcatgtgactttattacggcaagtagccagtggagaaaagttcaa
gaccgtttggaggatgatgaaagatgctcacgtcttgaaaaaattgatcgtttggaaatt
ttccaggaacatctacgcgatctagagagagaggaagaggagcagatgaaattacggatg
gaagaattgagaaaagcagagcgtaaaaatcgtgatgagttccgcaagttgatggaaggg
catgttgctgcaggcatacttacagctgaaactcactggcgggactactgtacgaaggta
aaagatttacctgcatatctggctgtctcatcaaatgcttcgggttcaacagcaaaagat
ctgtttgaagatgttgctgaggagctacagaaacagtatctcgatgacaaggctcgaata
aaagatgcaatgaagttcagaaagattgctctgtcatcaacctggacacttgaagacttt
aagtctgcaattaatgaacacatcagctctccacaactagcagatatcaacttaaagctt
gtatttgatgagttgctagaaagagtaaaggagaaggaggagaaagaagctaaaaggcgg
aaacgtcttgcagatgacttttatgatctcttgtgtaattcaaaggacgtaactgcatct
tcaaaatgggaggactgcaaacaactcgttgaagatagacaagagagctggttcaatgtg
gaagagagcttcttcagggagatctttgagaaatacataacagaactgaaagagaaggca
aaggagaaggaacgaaagcgaagggatgataaggccaaaagagatagagatgcgaaggat
agagagaagaagaagaaggagaaacaaattcgggagaaaggaagaggatttgaaagcaaa
aatgggaaggatggtacacacagtgataatgctgaaaaaattgagtcttatggtttggaa
gagaacagaagatctggaaaagataaggataagaaacatcggaaacgtcaccgacattct
gtggatgatttgagtgtggatgaaaacgagaaagaccggagtaaggactcccacaggcat
agcagtgactggaaaaaatcaaagcagatggagcagcgtagcacttctgaactagatagt
gaaagcaggcacaagagacacaagaaagatcaccgggatggttctcacagaaatgctgat
tatgaggaggttaaaaacaggcaatttggtgaggatggggaagtttggtag
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integrated database retrieval system
