KEGG   Camellia sinensis (tea plant): 114295501
Entry
114295501         CDS       T07364                                 
Name
(RefSeq) WD-40 repeat-containing protein MSI1-like
  KO
K10752  histone-binding protein RBBP4
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03082  ATP-dependent chromatin remodeling
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114295501
   03083 Polycomb repressive complex
    114295501
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114295501
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     114295501
  Histone modification proteins
   HAT complexes
    HATB complex
     114295501
   HDAC complexes
    Sin3A-HDAC complex
     114295501
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     114295501
    PRC2.2
     114295501
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     114295501
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114295501
  Chromatin remodeling factors
   NuRD complex
    114295501
   NuRF complex
    114295501
   NuRF complex (fruit fly)
    114295501
SSDB
Motif
Pfam: CAF1C_H4-bd Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz WD40 Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_Prp19 Beta-prop_TEP1_2nd WDR55 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WD_LRWD1 Phage_CRI
Other DBs
NCBI-GeneID: 114295501
NCBI-ProteinID: XP_028095534
LinkDB
Position
Unknown
AA seq 287 aa
MGKDDDEMRGEIEERLVNEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILRTHTSENEPNYLMLAQVQLPLKDAENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYTPQNQFIIATKTISAEVYVFDYSKHPSKPPLDGACSPDLRLRGHNTE
GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKALDAMQIFKVHEGVVEDVAWHLRHE
YLFGSIGDDQYLHIWDLRTPSVTKPIQSVIAHQSEVSVQSFRSLLDA
NT seq 864 nt   +upstreamnt  +downstreamnt
atggggaaagacgacgatgagatgagaggagagatagaggagagattggtaaacgaagag
tacaagatttggaagaagaacacaccgttcttgtacgatttagtcatcactcatgctctt
gaatggccttctctcactgttgagtggcttcccgatcgggaagagccgccggggaaggac
tactcggtccagaagatgattttgcggactcacacatccgagaacgagcctaattacctc
atgctcgctcaggttcagcttccactcaaagatgcagagaacgatgccagacattacgat
gacgatcggtctgatttcggtggatttggctgcgccaatggcaaggttcaaataattcaa
caaatcaatcatgatggagaagttaaccgagctcgttatacgccccaaaaccaatttatt
attgccactaagacgattagtgctgaagtatatgtttttgattatagcaaacacccatcg
aagcctcctctagatggtgcatgcagtcctgatttgaggttgaggggccacaacactgaa
ggatatggtttgtcatggagtaagtttaaacagggtcatttgttgagtggttctgatgat
gcccaaatatgtttgtgggacatcaatgcgactcctaagaataaggctctggatgccatg
caaatatttaaggttcatgaaggtgttgtagaagatgtagcatggcatctgaggcatgaa
tacttgtttggttcaattggggatgatcagtatctgcatatatgggatctccggactcca
tcagtcaccaagccaattcaatctgtaattgctcatcaaagtgaggtcagtgtccaaagt
ttcagaagtctattggatgcttag

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