KEGG   Camellia sinensis (tea plant): 114296265
Entry
114296265         CDS       T07364                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
csin  Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:csin00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csin04812]
    114296265
Cytoskeleton proteins [BR:csin04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     114296265
SSDB
Motif
Pfam: Katanin_con80 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EML Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st eIF2A Beta-prop_Vps41 Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_WDR75_2nd VPS8_N
Other DBs
NCBI-GeneID: 114296265
NCBI-ProteinID: XP_028096352
LinkDB
Position
Unknown
AA seq 813 aa
MVIGVSSVTDWLSGVAFLFDIFVFLTKLEIEEFLAHSGSVNCLNIGKKTCRLFATGGDDQ
NVNIWSIGRPTSLMVYLSCVIVQSLCGHTSPVESVTFDLTEALLLAGASAGVIKLWDLDE
TKMVRTLTGHRSNCTAVEFHPFGEFFASGSMDTSLKIWDIRKKGCIHTYKGHTGGISTIK
FTPDGRWVVSGGFDNVVKVWDLTAGKLLHDFKFHEGHIRSIDFHPLEFLLATGSADRTVK
FWDLETLELIGSTRPEEATGVRSIAFHPDGRALFCGLDDSLKVYSWEPVMCQDTVDMGWS
TLGDLCIHDGKLLGCSYYRNSVAVWAADISLIEPYGTGIVPTQNNRSEQKCDLQESSLAK
VGSQRRNASNFRCPSPDYETKEIKNIYVDTAGGNPVASKRVGSNTSSKVVHPSDSKGMDN
LPTQKQGPVLGVLAKTIGHRRSKSFVVPSVVPRDGHDGKDTANSRREAVIPARPSTGTSL
KPHHVRRPSLAAKFDVERLSVPVESESIRKTSGDKATDPTFHERLVADDAREDSGEKHLN
IDSVAWKFEKKLSPLAPPSQENCNESLNGTEGTNSVKVVNGVAVVQGRTRSLVERFERRE
RLNSDEVQAPDTTPQIRPETAKISPMLNGHPQITERELTSANDGNVAEDLMQNHDVFLST
LRSRLTKLQVVRHFWERNNIKGAIDATRKLPDHSVQADLISILMEKMEVLTLDLFSCLLP
VLLGLLDSKMERHASISLEMLLKLVAVFGPVVHSTISASPAVGVDLHAEQRLECCNQCFI
QLQKIQKYLPVLVRRGGLLAKCAQELNVVLQNS
NT seq 2442 nt   +upstreamnt  +downstreamnt
atggtgattggagtttcgagcgtaactgattggttgagtggtgttgcatttctatttgat
atatttgttttcttaaccaaattggaaatagaggagtttttggctcattcggggagtgtg
aactgtcttaatattgggaagaagacgtgtcggctttttgctactggtggggatgaccaa
aatgtgaatatttggtcgattggcagaccgacttctttaatggtttatctttcttgtgtg
attgtgcagagcttgtgtggccacacgagcccagtagaatctgtaacatttgatttgaca
gaggctttattgcttgctggtgcttctgctggtgtcataaagttatgggatttggatgaa
acaaagatggttcgcactcttactggacacagatcgaattgcactgctgttgaattccat
ccatttggtgaatttttcgcctctggttctatggatactagtctaaagatctgggatatc
agaaagaaaggatgcattcacacatacaagggtcatactggaggcattagtactataaaa
ttcacgcctgatggtcgctgggtagtatctggtggatttgataatgttgtaaaggtatgg
gacctaactgctggaaagctcttgcatgatttcaagttccatgaaggacatattcgatcc
attgatttccatccgcttgaattccttctggcaacaggttcagcagacaggacagtgaag
ttttgggatttggaaaccttggaactgattggatctaccagaccggaggaggctacagga
gtacgatcaattgcctttcacccagatggtagagccctgttttgtggattggatgatagt
ttaaaggtttattcatgggagcctgtaatgtgtcaagatactgtggacatgggatggtca
acgctgggtgacctctgtatccatgatgggaagctcttgggttgctcatattatcgaaac
tctgttgcagtttgggcagctgatatttcacttattgaaccatacgggactggtattgta
cctacacaaaataaccgctctgagcagaaatgtgatctccaagaaagttctttggcaaaa
gttggaagtcaaagaaggaatgcttcaaatttccgctgcccatctccagattacgagact
aaagaaataaaaaatatatacgtggacactgcaggaggaaatccagttgcttcaaaaaga
gttgggtccaatacctcttctaaggttgtacacccatctgattccaagggaatggataat
ctaccaacccagaagcaaggtcctgtacttggcgtgcttgcgaaaactatagggcataga
cgtagtaaatcttttgtagtacctagtgttgtacctcgggacggtcatgatggaaaagac
actgccaattctagaagggaagctgttatccctgctaggcccagcactggtacgtcattg
aagccacatcatgtacggaggccatcgttggctgccaaatttgacgtggagagactgtca
gtgcctgttgaatctgaatctattagaaaaacaagtggtgacaaagcaacggatccaacc
ttccatgaaaggcttgtagcagatgatgctagagaagactctggggaaaagcatttgaat
atcgacagcgttgcatggaagtttgaaaagaaattatcacctctggcaccacctagtcaa
gaaaactgtaatgagtccctcaatggcactgaagggacaaattcagttaaagttgtgaat
ggagtggcagttgtacaaggaaggacacgttctctggttgagaggtttgaaaggagagag
agattaaatagtgatgaagttcaagcacctgatacaacccctcaaataagacctgagacg
gctaaaatatcccccatgttgaatggacatccacaaataactgaaagggagttgacatct
gcaaatgatggtaatgttgccgaagatctgatgcagaatcatgatgtattcttaagtacc
cttcggtctcgcttgacaaaattacaggtggtgcgccatttttgggaacggaataatatc
aagggtgctatagatgctacgaggaagttgcctgatcattctgtacaagcagacctgatc
agtattctcatggagaaaatggaggttctcaccttagatctgttctcatgcctgctgcct
gtgcttttgggtttgttggatagcaagatggaaaggcatgccagtatttccttggagatg
ctattgaagcttgtagcggtctttggcccagtagtccactcaactatttcagcatctcca
gctgttggcgttgatcttcatgcagagcaaaggctcgaatgctgcaatcagtgctttatc
caactccaaaagatccaaaaatatcttccagtgcttgtaaggaggggtggtttgctggca
aaatgtgctcaagaactaaatgtagttcttcaaaactcataa

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