Camellia sinensis (tea plant): 114297100
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Entry
114297100 CDS
T07364
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 1 homolog
KO
K10683
BRCA1-associated RING domain protein 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114297100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114297100
04121 Ubiquitin system [BR:
csin04121
]
114297100
03036 Chromosome and associated proteins [BR:
csin03036
]
114297100
03400 DNA repair and recombination proteins [BR:
csin03400
]
114297100
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
114297100
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
114297100
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
114297100
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
114297100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT_2
BRCT
zf-C3HC4_2
zf-HC5HC2H
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_6
zf-C3HC4_4
zf-HC5HC2H_2
zf-RING_5
zf-RING_10
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114297100
NCBI-ProteinID:
XP_028097261
LinkDB
All DBs
Position
Unknown
AA seq
1008 aa
AA seq
DB search
MADFPHLEKMGRELKCPICLSLLKSAVSLTCNHVFCNLCIEKSMKSDSSCPVCKVPYRRR
EVRPAPHMDNLVSIYKSMEIASGVNIFVTQTVPSIKLAEEDNQLEGGKICEQESGRTCQD
TPKNRRRFKGKQPKKSLKTNQESSNTDPVKPSFPTKKRVQLPQFPPSASPIRPAMFGSGL
GENTKNQPEKSSVVLKEKRAVNEKGEAVFTPFFWLRDEEDVEKLSQQTDGGHNLDTPPNA
PCFSDIKDSDDEIPSGIAPKEGTNIALNDANYFDSEMFEWTQRPCSPELCSSPINLQVAD
TDEFNGIQEKECKASSQGAVINGEIRIEKSENAVSKPRTDNVEGSLIALSLPRTENINTG
DRMKKSKKRGRKASEITKKKQTKSTMSEVLGVPVESQKVAENSILKQNLLNLNTRTHKRD
KKVMFDISAIELVPENISVLDVEASPLNQDNDTVVTDLPASSDKKESSNKSIGRRRDQPK
RLKTHNLGSSKNNITQNQSKEDFISQLSSIYLPLAVKKNVPDLGVKTSKSEIKTTTNPKC
DQDMRRSKKQKIYTDEISKDNKLVDAALDGCNEVTVKKTQLSGKVQGNSEVLQGISVTEK
SLRASEGVVFYKCDTDPHKVQCAFCRSTKDSEVSGIMVHYLNGKPVSADYNGGSKVIHAH
KNCTEWAPNVYFEDDNAINLEAELARSRRIKCCCCDIKGAALGCYEKSCRKSFHVPCAKL
IPQCRWDNDNFVMLCPLHASSKLPNEKSGTQIKRKKKCIPKGPSPSYQPEVAVKHASSTC
KHWSSHGSSERMVLCCSALANAEREIVSEFERSSKVMVLKNWDSSVTHVIASTDENGACR
RTLKVLMGILEGKWILNIEWIKASMKAMEPVDEQLYEIGVDIHGIKDGPRLGRLRVLNKQ
PKLFNGFKFYFAGDFVTSYKGYLHDLITAAGGTVLQRKPIPSGHESLSTFIIYSRELPDK
CDPSKRNLIFNTRQSDAKALASSTGATVASNSWVLNSIAACKLQNLAE
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atggcggactttcctcacctcgagaaaatgggcagagaactcaagtgccccatctgcttg
agtctcttgaaatctgcagtttcactcacatgtaaccatgtattttgcaatttatgtatt
gagaaatctatgaaatcagattccagttgtccagtttgtaaggttccatatcgtcgcaga
gaggttcgccctgctcctcatatggataacctggttagcatttacaagagcatggaaatt
gcttccggggtcaatatatttgtcactcagactgtaccttcaatcaaattagcagaggaa
gataaccaacttgaaggtggtaagatttgtgaacaagagagtggtagaacttgccaagac
acaccaaagaatcgaagaagattcaaaggaaagcagccgaaaaagtcattaaagactaac
caagaaagttcaaatacagatcctgtgaaaccatcctttccaacaaagaaaagggtccag
cttccacaatttcctccttcagcatctccaataagacctgcaatgtttggaagtggattg
ggtgagaataccaaaaatcaaccagagaaaagttcagttgtacttaaggaaaaacgtgct
gtaaatgaaaagggagaagcggtctttactccatttttctggttaagagatgaagaggat
gtagaaaaattaagtcagcagacggatgggggtcataacctggatacaccaccaaacgct
ccttgttttagtgatatcaaggactcggatgatgaaatcccctctggaatagccccaaaa
gagggaacgaacattgcattgaatgatgctaattacttcgatagtgagatgtttgagtgg
acacaaaggccttgctctcctgaactctgttcaagccccataaatttacaggttgcagat
actgatgaatttaatggaattcaggaaaaggaatgcaaagcatcctcacaaggtgctgtg
attaatggggaaatcagaattgaaaagtcagaaaatgcggtttccaaaccaaggactgac
aatgtggaaggaagcttaattgcattgtccttgccaagaacggaaaatataaacactgga
gatagaatgaaaaaatctaagaagagaggtaggaaggcgagtgaaataaccaaaaagaaa
caaaccaaaagtactatgagtgaagttcttggagtcccagttgaatcacagaaagtggct
gaaaatagtattcttaagcagaatttgttaaatttgaacactagaacccataagagggac
aagaaggttatgtttgacattagtgccatagaacttgtaccagaaaacatttctgtttta
gatgttgaagcaagtcctctgaatcaggataatgatactgtggtcactgacttgccagct
tcatcagataagaaagaaagcagtaataagagcattggtcggcggagagatcagcctaaa
agattgaaaacccacaacctaggttcatctaagaataacataacacaaaaccaaagtaag
gaggattttatatcccaattatccagtatatatcttcctctagctgttaaaaagaatgtt
cctgatttgggtgtgaaaaccagcaaaagcgaaattaagaccacaacgaatccaaaatgt
gatcaagatatgagaaggtcaaaaaagcaaaaaatctacactgatgaaatctcgaaggat
aataagttggttgatgctgctttggatggttgtaacgaggttactgtcaagaaaactcaa
ctctctggaaaggttcaaggtaattctgaagtcttgcagggcatttcggtgacagagaag
tctcttcgtgcttctgaaggagtggtattttataaatgtgatactgatcctcataaagtc
cagtgtgctttctgtcgttctacaaaagactctgaggtctcaggaatcatggttcactac
ctcaatggcaagcctgtttcagcagattacaatggtggatcaaaggtcatacacgcacat
aagaattgcacagaatgggctcctaatgtatattttgaagatgataatgccatcaacctt
gaagctgaattagcaagaagccggaggattaaatgctgttgctgcgacatcaaaggggca
gctcttggatgttatgagaaaagttgccgcaagagcttccatgttccttgtgcaaagttg
atcccacaatgtcggtgggataatgataactttgtcatgttatgtcctctacatgcctct
tctaaacttcctaatgagaaatctggaactcagataaaaaggaaaaagaaatgcattcca
aaaggaccatccccaagctaccaaccagaagttgctgttaaacatgccagtagcacttgt
aagcattggagctctcatggatcatccgaaagaatggtcctatgttgttcagctctcgca
aatgcagagagggaaattgtttctgagtttgagagatcatcaaaagttatggtattgaaa
aactgggattccagtgtcacccatgtcattgcatctacggacgagaatggagcctgcaga
agaaccctcaaagttttgatgggaatcttagaggggaagtggatactgaatattgaatgg
attaaggctagcatgaaagccatggaacctgttgatgaacagctatatgaaattggtgtt
gacattcatggaatcaaggatggtcctcgacttggaagattaagagttctaaacaagcaa
ccaaagctctttaatgggttcaagttttattttgctggagattttgttacttcatacaag
gggtacttacatgatctcataactgcggctggagggactgttctacaaaggaaacctatt
ccaagtggtcatgaatccctgtcaacattcatcatttacagccgtgagctacccgataag
tgtgatcccagcaagagaaatttgattttcaacacgaggcagtcagatgcaaaagctcta
gcaagttccactggagccacagtggccagcaactcatgggttttgaactccattgcagcc
tgcaagctgcaaaatcttgcagaatga
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