Camellia sinensis (tea plant): 114297328
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Entry
114297328 CDS
T07364
Name
(RefSeq) zinc finger CCCH domain-containing protein 40-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114297328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114297328
Spliceosome [BR:
csin03041
]
Complex B
Other components
Prp19-related factors
114297328
Complex C
114297328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
RRM_1
zf-CCCH_RBM22
Torus
zf_CCCH_4
zf-CCCH_2
zf-CCCH_12
zf-CCCH_3
zf-CCCH_10
RRM_YTH1
zf-CCCH
zf-CCCH_4
RRM_3
RRM_occluded
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
114297328
NCBI-ProteinID:
XP_028097537
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MAHRLLRNVEADGWERSDFPIICESCLGDNPYVRMTKADYDKECKICTRPFTVFRWRPGR
DARYKKTEICQTCSKLKNVCQVCLLDLEYGLPVQVRDTALSINSNDAIPKSDVNREYFAE
EHDRRARAGIDYESSYGKVRPNDTILKLQRTTPYYKRNKAHVCSFYIRGECTRGAECPYR
HEMPETGELSQQNIKDRYYGVNDPVALKLLNKAGEMPSLEPPDDESIKTLYVGGLDARVT
EQDLRDNFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLVIKGLRLKLMWGR
PQAPKPEGESSDGARQPATVAHSGMLPRAVISQQQNQLQPPGTTQDQPQPTHYFNIPPPP
QQDRTYYPSMDPQRMGALVLSQEGAPNRPTGSVDNKTDSEKQQQGGQHYGYQALPPLPPP
PPQGQFHQPFYPPYGYMPPPPPPPPYQQYPPPPYHPTMRPMPPQPQPPPVAQQYQHSEQP
GSSQK
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacaggttgctgagaaacgtcgaagctgatggttgggaacgctcggacttccca
atcatatgcgagtcgtgcctgggcgacaatccctacgttcgaatgacaaaagcagattat
gataaggagtgcaagatttgtacaaggccctttacagtttttaggtggaggccaggtcgt
gatgctaggtataaaaaaactgaaatttgccagacttgcagtaagttgaaaaatgtttgc
caagtttgccttttggatcttgaatatggattgccagttcaggtccgagacactgctctc
agtatcaattccaatgatgccattcctaagagtgatgtgaatagggaatactttgcagag
gagcatgaccgcagggctagagctggtatagattatgaatcttcatatggaaaggtacgg
ccaaatgataccattttgaagcttcagagaacaactccatattacaagagaaacaaagca
catgtttgtagcttttacatacggggagaatgcacaagaggtgctgagtgcccttacagg
catgagatgcccgaaactggagagttgtcacaacaaaatattaaagatcgctactacgga
gtgaatgatcctgtggcattgaaactactaaacaaggcaggcgaaatgccctcactggaa
cccccagatgacgagagcatcaaaaccctctatgtgggtgggcttgatgcaagagtgact
gagcaagacttgagggacaacttctatgcccatggtgaaatagagtctgtaaggatggtg
ctgcaacgtgcttgtgcttttgtaacctacacaacaagagaaggtgcagagaaagcagct
gaagaactctccaacaagcttgtcataaagggtctgaggctgaagctgatgtggggtaga
ccacaagcaccaaaaccagagggtgaaagctcggatggagcaagacagccggcaacagtg
gctcatagcgggatgttgcctagggcagtcatatcccaacaacagaaccaactacagcca
ccaggtactactcaggaccaaccccaaccgacgcattacttcaatattcctccgccacct
cagcaggataggacatattatccatcaatggatcctcagagaatgggtgccctagttcta
tctcaagagggggctcctaatcggcccacagggtccgttgataacaaaaccgattcagag
aagcagcaacaaggagggcagcattatggttaccaagctttgccgccgctgccgccgccg
ccacctcaaggtcaatttcaccagccattttatccaccatacgggtatatgcccccgccg
ccaccacctccaccttaccagcaataccctcctccaccttatcaccctacaatgcgccct
atgccaccacagccgcagccgccaccagtggcccagcagtatcaacattctgaacagcca
ggatcatcccagaagtga
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integrated database retrieval system
