Camellia sinensis (tea plant): 114301735
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Entry
114301735 CDS
T07364
Name
(RefSeq) vacuolar protein sorting-associated protein 35B-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114301735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csin04131
]
114301735
Membrane trafficking [BR:
csin04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
114301735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
114301735
NCBI-ProteinID:
XP_028102498
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MISNGVEDEEKWLAAGIAGLQQNAFYMHRALDSDNLRDALKYSAQMLSELRTSRLSPHKY
YDLYMRAFDELRKLEMFFREENRRGCSIIDLYELVQHAGNILPRLLPCLKNSVEPCALKK
MCFGEKLIFPNCFIHGMSLLKEGVEMNWYLLCTVGSVYIKSKEAPAKDVLKDLVEMCRGI
QHPVRGLFLRSYLSQISRDKLPDIGSEYEGDADTVVDAVEFVLQNFTEMNKLWVRMQHQG
PVWDKERREKERSELRDLVGKNLHVLSQIEGVDLDMYRDTVLPRILEQVVNCKDDLAQYY
LMDCIIQVFPDEYHLQTLETLLAACPQLQPSVDIKTVLSRLMERLSNYAASSPEMLPEFL
QVEAFAKLNNAIGKVIEAQVDMPIAGAVTLYSSLLTFTLHVHPDRLDYVNQVLGACVKKL
SGKGKLDDSRATKQIVVLLSAPLEKYNDIDTALKLSNYPRVMEHLDDATNKVMAGVIIQS
IMKSRTCISTADKVEALFELIKGLIKDLDENLHDELDEEDFNEEQNSVARLIQMLYNDDL
EEMLKIICTVRKHILTGGPKRLPFTVPPLIFNSLKLVRRLQGQEENAAGEEVAPTPKKIF
QLLNQTVEALLTVPVPELALRLYLQCAEAANDCDLEPVAYEFFTQAYILYEEEISDSRAQ
VTAIHLIIGTLQRIHVFGVENRDTLTHKATGYSAKLLKKPDQCKAVYACSHLFWVDENDS
IKDGERVLLCLKRALRIANAAQQMANATRGSSGSVMLFIEILNKYLYFFEKGNSEIGVSA
IQGLIELVTTEMQSENMTPDPAADAFFSSTLRYIQFQKQKGGAMGEKYEPIKCDLAG
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgatttccaacggagtcgaagacgaagagaaatggctggcggcagggatcgctggcctt
caacagaacgccttctacatgcatcgtgctctggactccgacaatctcagggacgccctc
aaatactccgctcagatgctctccgagcttcgcacttcgcggctctcccctcacaaatac
tacgacctctacatgcgagcttttgatgagttgagaaagctggagatgttttttagagag
gagaatcggcgtggctgctccattattgatctgtatgaacttgtccagcacgccggtaac
atattgcccagattgttgccttgcctgaagaattcagtggagccatgtgctctgaaaaaa
atgtgttttggggagaagttgatctttccaaattgttttattcatggaatgagtttactg
aaagagggtgttgaaatgaattggtatctcctttgtacagtgggatctgtgtacatcaag
tctaaggaagctcctgcaaaggatgtccttaaggatctcgtggaaatgtgccgtggcata
caacaccctgtacgtgggcttttcttaaggagttatctttctcaaatcagtagggataaa
ttgccagatattggttctgagtatgaaggggatgctgacactgtcgtggatgctgtggag
tttgtactccagaacttcacagaaatgaacaaactttgggtgcggatgcagcatcaggga
cctgtttgggacaaggagagacgggaaaaggaaaggagcgagcttcgtgatcttgttggg
aaaaacctgcatgtcctcagtcagattgaaggtgttgaccttgatatgtacagagatact
gttcttcccagaatcttggagcaggttgtcaattgtaaagatgatcttgcccaatactat
ttgatggattgcataattcaagtctttcctgatgagtaccacttgcagacccttgagaca
ttgttggctgcttgcccccagcttcagccatccgttgatatcaagacagtgctttcacgg
ttaatggaaaggttgtcaaattatgctgcttcaagtccagaaatgttacctgaattctta
caagtagaagcttttgcaaaactgaataatgccatagggaaggtgattgaagcgcaggtt
gacatgcctatagctggagctgtgactctatattcttctcttcttacatttactcttcat
gttcaccctgatcggcttgattatgtaaatcaagtattgggagcatgtgttaagaaactc
tctgggaaaggaaagctggatgacagcagagcaacaaaacagattgttgtacttctaagt
gctcccttggagaaatataatgatattgacactgccctgaagctttctaactatccccgt
gtcatggagcaccttgatgatgcaacaaacaaagtcatggctggtgttatcattcaaagc
atcatgaaaagcaggacttgtatttctactgctgacaaggttgaggcattgtttgaacta
ataaaaggtcttatcaaagatttggatgagaatcttcatgacgagcttgatgaggaggat
ttcaatgaggagcagaattctgttgcacgtctcattcagatgctgtataatgatgatctg
gaagagatgttaaagatcatatgtactgtgaggaagcatatcctgaccggaggacctaag
cggcttcccttcactgttcctccccttatttttaattctctcaagttggttagacgactg
caaggccaggaggaaaatgctgctggagaagaggtagcacctacaccaaagaaaattttt
cagcttttgaatcagacagttgaagctttgttaactgttccagtacctgaactggcatta
aggttgtacttgcaatgtgctgaggctgcaaatgactgcgatctagaacctgtcgcctat
gaatttttcacccaagcttatatactatatgaagaagaaatttcggattcaagagcacag
gtgaccgcaatacatttgattatagggactcttcagaggatacatgtctttggtgttgag
aacagggatacgttaacacacaaagccacggggtattcagcaaagcttttgaagaagccc
gatcagtgcaaagctgtttatgcgtgttcacatctcttttgggttgatgaaaacgatagc
atcaaggatggcgagagggtattgctttgcttaaagcgtgctttgagaattgctaatgct
gctcaacaaatggctaatgcaacacgaggtagcagtgggtcggtcatgctcttcatcgaa
atattaaacaagtatctctatttctttgagaaggggaactcagagattggtgtttctgca
atccagggcttgattgaattagtcacaaccgaaatgcaaagtgaaaatatgacaccagat
ccagctgcagatgctttcttctccagtacgctgcggtacatccagttccagaagcagaag
ggtggtgctatgggtgagaaatacgagcccatcaagtgtgatttagccggatga
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