Camellia sinensis (tea plant): 114302071
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Entry
114302071 CDS
T07364
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114302071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114302071
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114302071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
114302071
NCBI-ProteinID:
XP_028102836
LinkDB
All DBs
Position
Unknown
AA seq
233 aa
AA seq
DB search
MTHKITLGNNSELLEDQSVESRELHLTIRELEIQKREQKGLSFANASSDLLSEMEVDAFR
HLFPLCFHECHLLESIHPDARKLGKARDTTLALGAVVYADGQALAKIGCTTMLAAIKMEV
MTPTTESPDEGCIIIDFHMPPICSPIVRPGNPANVAPVISKQLCDTILSSGMINFKELSL
VGGKAAWMAYLDIYCLDADGAFFDVALLAAVVVFSHYKIYTPFTFLSFFLCMP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaagataacattaggaaataacagcgagctgttagaagatcagagtgtagaa
agcagagaattacatctaacaattagagaattagaaatacaaaaaagagaacaaaaggga
ttgagttttgcgaatgcctctagcgatttgttatcagagatggaggtggatgcttttagg
catctctttcctctatgctttcatgagtgtcacctacttgaatccattcaccctgatgct
aggaaacttgggaaagctagagatacaacacttgctcttggagctgttgtttatgctgat
gggcaagctttagccaagataggttgcacgaccatgttggctgccattaaaatggaagtc
atgacacctaccacagagtcaccagatgagggctgcataattattgatttccacatgcct
ccaatttgttctcctattgttaggcctggcaacccagctaatgtagcaccagttatatcg
aaacaattatgtgacactatcttgagttctggcatgattaacttcaaggagctatccttg
gtcggtgggaaagctgcttggatggcctacctagacatatactgtttggatgcagatggt
gctttttttgatgttgcgttacttgcagcagttgttgtcttttctcattataagatatac
acaccatttacatttttatcattcttcttgtgcatgccttaa
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