Camellia sinensis (tea plant): 114302177
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Entry
114302177 CDS
T07364
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114302177
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
114302177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
NBCH_WD40
WD40_CDC20-Fz
EIF3I
WDR55
Beta-prop_Vps41
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_TEP1_C
PQQ_3
WD40_RFWD3
BCAS3_WD40
Beta-prop_HPS5
PROPPIN
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
114302177
NCBI-ProteinID:
XP_028102975
LinkDB
All DBs
Position
Unknown
AA seq
415 aa
AA seq
DB search
MASSPLQEIILASSPDGIITAFDASSGTTLARFTGSRSPRKGLVVIGNNLIAASHVSSDT
AAASIHLYNWWSSTASHHIPITEPVGPLAATFDGSYLFAGGLSGHVHALSVPSSDTIRTI
FAHRKPVSCLAINDDGSLLFSGSDDGTIAVFPIYKLLENTSSKSTELVLHRFNGHESTVT
SVTTGIGASNCTIISCSLDCTCKFWSLMHGTHLRTVAFPCTIWGVEMDPTESEFYVAGSD
GSVYNGVMKGVGRHVVKQGHKLVTWTRKHKGAVIALAMMNGGQNLVTASDDGSIWIWDVF
RKEVVTVLSEEMGSISELVVVKGFGDCGSHGLGASEGNDEFSRWRSGFTSRELSRPMREV
TGMEQMLGVLARDRSKAIDTLGSAIQAYEKLLGLVLKEAKVGSNCDTSKEEEDDK
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatctcctttgcaagaaatcatccttgctagctctccagatggaatcatcact
gccttcgatgcttcctcaggcaccaccttagctcgcttcactggaagccgatcacctcga
aaaggccttgtggttattgggaacaatctcatcgccgcctctcatgtgtcctcagacact
gctgcagcctccattcatctctataactggtggtcctccaccgcctcgcaccacatccct
attactgaaccagttggtccacttgccgccacttttgacggctcgtaccttttcgctggt
ggcctttcaggccatgtccatgcgctctcagtcccttcgagtgacacaattcgaaccatt
tttgctcatagaaagcctgtgtcttgcctggcaatcaatgatgatgggtcactcttgttt
tcaggcagtgatgatggaaccattgcggtttttccaatctataaacttctggagaacacg
tcttccaagtcgactgaacttgtattgcatcgattcaatgggcatgaatcaaccgtcact
tctgtcactaccgggattggagcatccaattgtactataatttcgtgctctttagattgc
acgtgtaagttctggagcctaatgcatgggacccacctgcgtaccgtagcattcccgtgt
acaatttggggtgtggaaatggaccccacggaatctgagttctacgttgcaggatcggat
ggttcggtgtacaacggagtgatgaagggcgtagggagacatgtggtgaaacaagggcat
aaattagtcacgtggacaaggaaacacaagggagcagtgattgcgttggcaatgatgaac
ggagggcagaatttggttactgcttcagacgatgggagcatttggatttgggatgttttt
agaaaagaggtggttacggttctcagcgaggaaatgggaagcattagtgaacttgttgtg
gtcaaagggtttggtgattgtgggagccacggacttggagcaagtgaaggtaatgatgaa
tttagcagatggaggtcggggttcaccagtagagagctgagtaggccgatgagggaggtg
acggggatggaacagatgttgggtgttttggcacgggataggagcaaagcgattgataca
cttggatcagcaatccaggcttatgagaaactcttgggacttgttctcaaggaagccaaa
gtaggaagtaactgtgatacaagtaaggaagaagaagatgataaatga
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