Camellia sinensis (tea plant): 114303358
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Entry
114303358 CDS
T07364
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 52C-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114303358
03041 Spliceosome [BR:
csin03041
]
114303358
03036 Chromosome and associated proteins [BR:
csin03036
]
114303358
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114303358
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114303358
mRNA cycle factors
Common to processing body (P body) and stress granule
114303358
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114303358
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114303358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF5320
Motif
Other DBs
NCBI-GeneID:
114303358
NCBI-ProteinID:
XP_028104305
LinkDB
All DBs
Position
Unknown
AA seq
632 aa
AA seq
DB search
MSWADSVADPYARPIRSSWRTYVPPHLRPNTDNAVFGNSNHFGSSSSANRFDRSGRAGSS
RGRGRGGGFRGRGRSWGRQTQFHDAPNSDPFDIVEKFDELEVIEDCDDVVGGGGGGGGLN
FDAYEDIPVETSGSDVPPPVNSFAEIDLGKALIDNIKRCKYVKPTPIQRHSIPISIAGRD
LMACAQTGSGKTAAFCFPIISGILRNQTMSPVSNRINIAYPSALILSPTRELSCQIHDEA
KKFSHQTGVKVVVAYGGAPISQQLRNLERGVDILVATPGRLVDMIERARVSLRMIKYLAL
DEADRMLDMGFEPQIRRIVEQMEMPPPGARQTMLFSATFPTEIQRLASDFMSNYIFLAVG
RVGSSTDLIFQKVEFVQDMDKRNYLMDLLHTQCDNGAHGKCALTLVFVETKRGADALERW
LSMNGFPATAIHGDKVQMERERALKSFKSGFTPVLVATDVAARGLDIPHVAHVINFDLPK
DIDDYVHRIGRTGRAGKSGLATAFFSEKNMTLAKPLVELMQEAKQEVPPWLAQYAETSSA
YGSGGGRRYGGSKFGGRDFRNSTQFNSGDYNYSSSYADAVAVADSYVATSNACTYNTPVT
TDYAAAGVVDSFAADSRGFAFDQEPIVASGWD
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggctgactctgttgccgacccatacgcaagaccgattcgatcttcttggcgt
acctacgtccctccccatctcagacccaacaccgacaatgctgtttttgggaactccaat
cactttggctcgtcttcttctgctaaccggttcgaccggtctggtcgagccggttcgagc
cgcggccgtggtcgcggtggcggtttccgtggccgtggccgatcgtggggtcgacagact
caattccatgacgccccgaattcagacccatttgatattgttgagaaatttgatgagctt
gaggtgatcgaggactgtgatgatgttgttggaggaggaggaggaggaggaggtttaaat
ttcgatgcgtatgaagacattcctgttgagaccagtggctccgacgtacctcctccggtg
aattcttttgcagaaatcgatttgggaaaggctttgattgataatatcaagaggtgtaag
tatgtgaagcccacacctattcagcgacactccatacccatttcaattgcagggagggac
ttgatggcttgcgctcaaaccgggtctgggaaaacagctgcattttgttttccgatcata
agtggcattctcaggaaccaaacaatgtcaccggtgtcgaatcggatcaatattgcttac
ccttctgctctcatactgtccccaactagagaattgtcttgccagatacatgatgaggcc
aagaagttctctcatcaaactggtgtcaaggttgttgttgcctatggaggggcacccatt
tcccagcagctccgtaatctggaaaggggtgtggacatattagttgccacaccggggcgc
ttagtagatatgatagagagggcaagagtttctcttcggatgatcaagtatttggctttg
gatgaggctgatcgaatgttggatatgggctttgagccccagattcgaaggattgttgag
caaatggagatgcctccaccaggtgcaagacagacgatgcttttcagtgccacatttcca
actgagatacaaaggcttgcttcggactttatgtcaaactacatatttcttgctgttgga
agagttggttccagcactgatctaatttttcaaaaagttgaatttgtccaagacatggac
aaaagaaattatttgatggatcttcttcatacccaatgtgataatggagcccatggaaag
tgtgccttgacactggtttttgtagagacaaagagaggggctgatgctttagagcgctgg
ttgtccatgaatggttttcctgccacagcaatacatggtgacaaagtgcaaatggagaga
gaacgtgctttgaagtccttcaaaagtggattcaccccagtcttggttgcaacagatgtt
gctgcacgaggactggacatcccacatgttgcccatgtcatcaactttgacctgccaaaa
gacatagatgactatgttcataggataggacgaacgggccgtgctggtaaatcaggtcta
gcaacagcatttttcagtgagaagaatatgacccttgcaaagccacttgtcgaactcatg
caggaagcaaaacaagaagttccaccctggcttgctcaatatgcggagacatcatcagcc
tatggtagtggtggtggtcgtcgttatggaggtagcaagtttggtggccgtgactttcga
aatagtacccagttcaacagtggggattataattattctagctcatatgccgatgctgtt
gctgtagctgattcttatgttgccacgtctaatgcgtgtacttacaatactcctgtcact
actgattatgctgctgctggtgttgttgactcttttgctgctgattcacgtggttttgcc
tttgatcaagaacctatcgttgctagtggttgggattaa
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