Camellia sinensis (tea plant): 114304022
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Entry
114304022 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114304022
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csin03041
]
114304022
03009 Ribosome biogenesis [BR:
csin03009
]
114304022
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114304022
Spliceosome [BR:
csin03041
]
Complex A
U2 snRNP components
U2 related factors
114304022
Complex B
114304022
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
114304022
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
Helicases
114304022
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
HA2_C
Helicase_C
Motif
Other DBs
NCBI-GeneID:
114304022
NCBI-ProteinID:
XP_028105009
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MAKVFLTEEEEIEDVCMKITKEIGNMGEACRPVKAVPLYSTLPLAMQXKIFEPAPPPXTE
GGPLGRKIVVSTNIAETSLTIDGIIYVIDPGFAKQKVYNRRIRVESLLVSPISKASAHQR
SGRAGRTQLGKCFRLYTEKSFNNDLQPQTYPEILXSNLANTVLTLKKLGIDDLVHFDFMD
NPSAPETLMRALEVLNYLGALDDKGNLTKLGEIMSEFPLDLQMSKMLVVSQEFTCSNEIL
SISTMLSVPNCFIRPKEAQKATDEANAWFGHIDGDHLTLLNVYHAYKXNNEDQSWCYENF
VNQRALKAADNMRXQLVRIMARFNFKQCSTDFNSRDYYINIRKAMLAGYFMQVAHLEHTG
HYLTMKNNQVVHLHPSNCLDHKPEWVIYNEFVLTSRNFICTVTGVRGEWLVDIAPHYFDL
ANFTPCEARCVLEKLYKKRENEKEESRNKK
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtatttcttactgaagaggaggagatagaagatgtatgtatgaaaataaca
aaagaaattggaaatatgggagaggcctgcaggcctgtgaaagcagtgccgctgtattct
acgcttcctcttgctatgcagtagaagatatttgaacctgctcctccccccnngactgag
ggcggccctcttgggaggaagattgtagtctcaacaaacattgcagaaacttctttgacc
atagatggtataatttatgtgatagaccctgggtttgcaaaacaaaaggtctataaccgt
cgaatacgtgttgaatctttgttggtctctccaatatcaaaggctagtgctcaccaaaga
tcaggtcgtgctggaagaacgcaactaggaaaatgttttagactctacactgagaaaagt
ttcaataatgatcttcagccacagacatatccagaaatactgtgatcaaaccttgcaaac
acagttctcaccttgaagaaactagggatagatgatctggtccattttgattttatggat
aatccctctgccccagagacattgatgcgcgcattagaggttttgaattacttgggagcg
ttggatgataaaggaaacttgaccaagctgggtgagatcatgagtgagttccccttggat
ctgcagatgtcaaagatgcttgttgtcagccaagaatttacctgttcaaatgagattctg
tctatttctaccatgctttcagtacccaattgctttatccggcctaaggaggctcaaaaa
gcaacagatgaagcaaatgcatggtttgggcacattgatggggatcaccttacgctcttg
aatgtataccatgcatacaagtaaaataacgaggatcaatcttggtgttacgaaaacttt
gtcaaccaaagggcattgaaagctgctgataatatgagataacagctagttcggatcatg
gctaggttcaacttcaagcaatgcagtacagattttaacagccgtgactactacatcaac
atcaggaaagctatgctagctggatatttcatgcaggtggctcatctggagcacactgga
cactatttaactatgaaaaacaaccaagtggttcacttgcacccttcaaattgcctggat
cataagccagagtgggtcatctataatgagtttgtcttaacaagcagaaatttcatctgc
acagtaacaggtgttcgtggggaatggttagttgatatagcaccacactactttgacctt
gcaaactttactccttgcgaggcaaggtgtgttcttgagaagctatacaagaaaagggaa
aatgagaaggaagagagcaggaacaaaaagtga
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