KEGG   Camellia sinensis (tea plant): 114304737
Entry
114304737         CDS       T07364                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like isoform X1
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    114304737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csin03021]
    114304737
Enzymes [BR:csin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     114304737
Transcription machinery [BR:csin03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     114304737
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 114304737
NCBI-ProteinID: XP_028105689
LinkDB
Position
Unknown
AA seq 1258 aa
MKKTKKMNKTIMRLLKSSEIHHASCNLNIESKLGQSDDMDDRGASSKDDMKLNVEDDIMD
LDDFFENLVGTSSKGEKSANGDAHMGLDDDDFMDPTAIQDLGEIFLKNFCKKASVSFFEQ
YGLISHQINSYNDFIKNGVQNVFDSIGEITVEPGYDPSKKGENEWKHASVKFGKVTLERP
QFWTGEKFSADSGKEFMDLLPRHARLQNMTYSSRMKVQIHVQVYSPKLVRSDKFKTGKEQ
YLDKEMLSDDNRDVLVGRIPVMLKSDLCWMNGVEKSDCDFDHGGYFLVKGAEKTFIAQEQ
ICLKRLWVSNNPTWAVSYRHVLRRKRVFIKLVDASEDKQISGGEKVLSVYFSGTEFPIWI
LFFALGVSSDREVVNLIDCHTEDSRIVNILVASIHDADKCAGFRRGGKALSHVEADLKRS
NFPPGESIEEFFSNYLFPNLSGFRRKARFLGYMVNCLLQAYTGRRKVDNRDDFRNKRLEL
AGELLERELRVHIKHAEKRMVKALQRDLYGDRQLHPIEHYLDASIITNGLCRAFTTGAWT
HPYKRMERISGVVAMLRRTNPLQAISDMRKTRQQVQYTGKVGDARYPHPSHWGKICFLST
PDGENCGLVKNLAITGLVSTNVEEPFLDQLLDCGMERLVDDTSTLLSGKYKVLVDGDWVG
VCEDSSWFVAQLRAMRRRKEVPLQVEIKRDEKHREVRIFSDPGRILRPLLVVDNLRKVKA
LKGGNYSFQTLLDNGIIELIGTEEEEDCRTAWGIKYLLMESEGKSPVKYTHCELDMSFLL
GLSCAIIPFANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTNTHQLYYPQRPLFRTML
SDSLGKPGYPLGHNGIVPRPEYFNGQCAIVAVNVHLGYNQEDSLVMNRSSLERGMFRSEH
IRSYKAEVDNKEALGKKPKYEDTVNFGKMQSKIGRVDSLDDDGFPFIGANLQSGDIVIGK
CAESGVDHSIKLKHTERGMVQKVVLSANDDGKNFAVVSLRQVRMPCLGDKFSSMHGQKGV
LGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFST
VSVDDITDQLHRAGFSRWGNERVYNGRTGEMIHSLVFMGPTCYQRLTHMSEDKVKFRNTG
PVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNI
ANVIQRPVPGGRKIRGPYCRFCESVEDIVRVNVPYGAKLLCQELFSMGISLKFETEVF
NT seq 3777 nt   +upstreamnt  +downstreamnt
atgaagaagacaaagaagatgaacaagacaatcatgagattattgaaatcgtctgaaatc
catcatgcatcttgcaatctaaatattgaatctaaattggggcaatcagatgatatggat
gatcggggagcaagtagtaaggatgatatgaaattgaatgtggaggatgatattatggac
ttagatgactttttcgaaaacctagtaggaacaagtagtaagggtgagaagtcagcaaat
ggagacgcgcacatgggtttagatgatgatgatttcatggatccaacagcaatacaagat
ttgggggaaatttttctgaagaatttttgtaagaaggcatcagtgtcattttttgagcaa
tatggactgatcagtcaccaaatcaactcttacaatgatttcataaaaaatggagtccag
aatgtgtttgattccattggtgagattacagtggagcctgggtacgatccatccaagaag
ggggaaaatgaatggaaacatgcttcagtaaagtttgggaaggtcacccttgagcgtcca
cagttttggacaggtgagaagttttcagctgatagtggtaaagagttcatggatttgttg
cccagacatgctcgccttcagaatatgacatattcgtcccgaatgaaagttcaaattcac
gttcaggtatattctccaaagctcgttagaagtgacaaatttaaaactggcaaagaacaa
tatctagataaggaaatgttaagtgacgataacagggatgtccttgtgggccggatccct
gtaatgctcaagtctgatttgtgctggatgaatggggttgaaaaaagcgactgtgacttt
gaccatggaggctatttcctagtcaagggtgctgagaagacattcattgcacaggagcaa
atctgcctgaaaaggctttgggtgtctaataatccaacttgggctgtttcataccgtcat
gttttaagaaggaaaagagtgtttataaaactagtggatgcttctgaagataaacagatt
agtggcggagaaaaagtcctttcagtgtatttctctggaacagagtttccaatctggatt
ttgttttttgccctcggtgtatcatccgacagggaagtggttaatttgattgactgtcat
actgaagattccagaattgtcaatatacttgttgcatcaattcatgatgccgacaagtgt
gctggctttcgtagaggagggaaagctcttagtcatgtggaggcagatctaaaacgtagc
aattttccacctggagaatctattgaagagttcttcagcaattatttgttccccaatctt
agtggcttcaggcgaaaggctcgttttcttggatatatggtcaactgtctgttgcaggcc
tatactggccgcagaaaagttgataacagggatgattttagaaacaagaggttggaactg
gcaggtgagctacttgaacgagaactgagagtccacattaaacatgctgagaagcgaatg
gtgaaggctctgcagagagatctttatggagatcgtcagctgcatccgattgaacactat
ctggatgcatcaatcatcaccaatggtctttgtagggcgtttacaaccggagcatggaca
catccttacaagaggatggaaaggatctctggtgtagttgcaatgcttaggcgaacgaat
ccattgcaggctatatctgatatgaggaaaacacgtcagcaggttcaatacactgggaag
gttggagatgccagatacccacacccatcacactggggaaagatttgctttctgtctacc
ccagatggtgaaaattgtgggcttgtaaaaaatctggccatcacaggactcgtcagcaca
aatgttgaggaaccttttcttgaccaattgcttgattgtgggatggagagactggtagat
gatacctcaactttgctttctggaaagtacaaagttttggtggatggggattgggttgga
gtatgtgaagattctagttggtttgttgcacagttaagggctatgcgacgcaggaaggaa
gtgccactccaggttgaaatcaaaagagatgagaagcacagagaagtgcggatattttct
gatcctggaaggattttacgtcctcttctagttgttgataacttacggaaggttaaagct
ctgaaagggggaaattacagctttcaaactctcctggataatggaataattgaacttatt
ggaactgaagaagaagaagactgccgaaccgcttggggaattaaatacctcttgatggaa
tccgagggcaagtcacctgtcaaatacacacactgtgaacttgacatgtcttttttatta
ggtttaagctgtgcaattatcccttttgcaaatcatgaccatgcaaggagggtcctctac
cagtctgagaagcactctcaacaggctattgggttttccacaacaaacccgaatatcaga
gtagataccaatactcatcagctttactaccctcaaaggccacttttccggacaatgctt
tctgattctcttggaaaaccaggatatcctctcggtcataatggaatagtgccaaggccc
gagtacttcaatggccaatgtgctattgtggcagttaatgttcacttggggtacaaccaa
gaggattccttggtaatgaatcggtcttcgttagagcgtggcatgtttcgatcagaacac
ataagaagctacaaagctgaggtcgataataaggaagcattagggaagaagcccaagtat
gaggacactgttaactttggaaagatgcagagcaaaattggacgtgttgacagccttgat
gatgatggttttccattcattggagcaaatctccagagtggtgatattgtcattggcaaa
tgtgctgaatcaggggtagatcacagtataaaattgaagcacactgaaaggggcatggtt
cagaaagtcgtgctatctgctaatgatgatggaaaaaactttgctgtagtatctttgaga
caggttcgaatgccatgtcttggtgacaagttttctagcatgcatgggcagaaaggtgtt
ttgggctttttggaatctcaagagaatttccctttcacaattcaagggattgtccccgac
attgtcataaaccctcatgcatttccttcacgtcagactcctggtcaattgctagaggct
gccttgggaaagggtattgcatgtggtggctcgctacgatatgccaccccgttttccact
gtttctgttgatgacataacggatcagcttcatagggctggattttcaagatgggggaat
gagagagtgtacaacggccgaacaggtgagatgattcactctcttgtatttatgggccca
acatgctaccagcgtctgacccatatgtccgaagacaaagtgaaatttcgcaacactgga
ccagtgcatccgctcaccagacagcccgtggcagacaggaagcgcttcggagggatcaaa
tttggcgagatggagcgtgactgccttatagcccatggtgcagcagccaatctccatgaa
cgactcttcactctcagcgactcctcccaaatgcacatctgccggaaatgcaaaaacatc
gcgaatgttattcagcggcccgtgcctggcggccgcaagattaggggaccctattgccgg
ttttgcgagtctgtggaagacattgtcagggtgaatgtgccctacggagcgaagttgctg
tgtcaagagcttttctccatgggcatatctttgaagtttgagactgaagtcttttga

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