Camellia sinensis (tea plant): 114305436
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Entry
114305436 CDS
T07364
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DEAH13-like
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114305436
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114305436
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
Helicases
114305436
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DHX37_C
WHD_HA2
DEAD
ATPase
AAA_RNF213_3
nSTAND3
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
114305436
NCBI-ProteinID:
XP_028106315
LinkDB
All DBs
Position
Unknown
AA seq
1091 aa
AA seq
DB search
MHISNTSNLADCPLQRVPTAPVVVHVSRPKEIENKRKDLPIVMMEQEIIEAINENITVIT
CGETGCGKTTHVLQFLYEASFGSDQSTVSSGITGVTQPRRVAILATAKRVAFELGFCLGK
EIGFQVRRDQRIGDSCSIKFMTDHILLRGVQSDFLLKKYSIIILDEAHERSLNTDILIGM
LSRIIQQRQIIYEEQQCKVLSGERISPERKISLLKLVLMSATLRVEDFISRRGIFCDPPL
VIETPTRQYTVTIHFSKXTEIMDYIGQAYKKVLSIHKRLPPCGILTFVTSQREEEYLCQK
LRQASKEIVENSFKRNMGNEVSTYSVGNAAEEYDMKEINEAYEMHGNSRHDKTDRFSSYD
EDHGDSDDNESDFSDDLGSDSDLESVDDDRGLLNQKTKVDDNIAEIFREDRDLDSLKAAF
EVLAGKTTLNSDFHEKQVVPSLEGSSNQSIPGLEEKRHVVNGLCAGAMCVLPLYAMLPAS
AQLRVFEEIKEGDRLVVVATNVAETSLTIPGIKYVVDTGREQVKNYNSSNGMETFEVQWI
SKASAAQRAGRAGRTGPGHCYRLYSSAVFNNIFPDFSSAEISKIPVDGVVLLMKSMGIHK
VSNFPFPTPREVXEAECCLKALEALDSKGRLTSLGKAMAQYPMSPRHSRMLLTVIQIMGK
VKIYGRANLVLGYTLAAAAALSLSNPFVMQFEGSHTDTDGLKKDESDSIDSKKRTDKEAK
LRKKKLKESAKVSCAKFYNLSSDALTVAYALQCFELSGNSVEFCDDKALHLKTMEEMSKL
RKKLLQLVFNQSFCGLQQEFSWTHGTAEDVERAWRVSSNKYPLLLNEEALLGQVICASWA
DRVAKHVRRVLASEGDIKVNASRYQAWMVKEPVFLHRRSSVAKSAPEFLVYSELLYTKRP
YIHGATSVKSDWLVKYAGSLCTFSAPLTDPKPYYDPLTDQVFCWVIPTFGPHLWQFPLHG
IPIKDDVHRVAVFAFSLLEGHVLPCLRSVRKFMAASLGSILRLEASGHRRVGNLLXKLKT
RLRIIDSCTTLREAWNENPRELHAEILDWFQEGFSGQSEELWLEMHREVLLDPKECFPKR
VKRDKKEKYRI
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcatatcagcaatacaagcaacctggcagattgtcctctgcagagagttccaactgct
ccagttgtggttcatgtatcaagaccaaaagagattgagaacaaaaggaaggatcttcca
atagtcatgatggagcaggagataattgaagctataaatgaaaacattactgttattact
tgtggggagactggttgtggtaagaccactcatgttctacagtttctttatgaagcaagc
tttggttcagaccaatctactgtttcgagtggcattactggtgttacgcaaccacgccgt
gttgctatccttgcaactgccaagcgggtggcatttgagcttggtttttgtctaggcaag
gagattggctttcaagttaggcgtgatcagaggattggagacagttgctccatcaagttt
atgactgatcacattttgttacgaggagtgcagagtgatttcttattgaagaagtactcg
atcataattttggatgaggctcatgagaggagcttgaacactgacatacttattggaatg
ctttctcgcattatacaacagcgccagataatctatgaggagcagcagtgtaaggtcctt
tcaggagaaagaataagccctgaaaggaagatctctctattaaaactggtgcttatgagt
gccaccttacgagttgaagacttcatttccagaagggggatattttgtgatcccccactt
gtgatagaaactccaactcgacagtatactgtaactatacacttctcaaagtgaacagag
attatggactacattggccaagcctataagaaggtcttgtcaattcacaagagattgcca
ccttgtggcatacttacatttgtcaccagtcagagagaagaagagtacttgtgccagaag
ctgcgtcaagcttcaaaggaaatagttgagaatagttttaaaagaaatatgggaaacgag
gtttctacatactctgtagggaatgccgctgaggaatatgatatgaaggagatcaatgaa
gcatatgaaatgcatggaaactcacgccatgataaaactgacaggtttagttcttatgat
gaagaccatggtgattcagatgataatgaatcagatttttctgatgatttggggtcagat
agtgatctggaaagtgttgatgacgatagaggtttattgaaccagaaaaccaaggttgat
gataatattgcagaaatatttagagaggaccgggaccttgattcattgaaggctgctttt
gaagttttggctggaaaaactaccttgaattctgattttcatgagaaacaggttgttcct
tctttggaaggaagctcaaaccaatccattcctggtctggaggagaaaaggcatgtagta
aatggtctttgtgctggtgcaatgtgtgttctgcccctttatgccatgcttcctgcatca
gcacagcttcgtgtgtttgaagagattaaggaaggagatcgcctagttgttgttgccact
aatgtggctgaaacctcgttaaccatcccaggtataaagtatgtagttgacactggaaga
gaacaggttaagaactataactcatccaatggcatggaaacatttgaagtccagtggata
agcaaagcatctgctgctcaacgtgcaggaagagctggaagaacagggcctggccactgt
tatcgcctctactcttctgcagtgtttaataacatttttcctgacttctcaagtgctgag
atatcaaaaatacctgttgatggcgtcgtcctcctcatgaaatctatgggcattcataag
gtttcaaatttcccatttcctactcctcgcgaggttnttgaagcggagtgttgcttaaag
gctcttgaagcacttgatagcaaagggagattgacatccctggggaaggccatggcacag
tatcccatgagccctcgccactctcggatgttgcttacagtaatacaaataatgggaaag
gtgaaaatttatgggcgggcaaatcttgttttaggatacacattggcagcagctgcagcc
ttgagcttgtcaaatccttttgtaatgcagtttgagggaagccacacagatacagatggc
ttgaagaaggatgagtctgactccatagatagcaagaaaagaactgacaaggaagcaaag
ttgaggaagaaaaagcttaaagaatctgctaaagtgtcttgtgcaaaattttataatctc
agcagtgatgctttgactgtagcttatgccttgcagtgctttgaactttctggaaactca
gttgaattctgcgatgacaaggcactacatctgaaaaccatggaggaaatgtccaagctg
agaaagaagctacttcaactagtgtttaaccaaagtttttgtggtcttcaacaggaattt
tcatggactcatggtactgcagaggatgtagaacgtgcttggagggtttcgtccaataag
tatcctctgctattgaatgaggaggcgctcttgggccaagttatatgtgccagttgggct
gatagggttgcgaaacatgtcagacgagtgttggcatcagagggagacataaaagttaat
gcaagtcgctatcaggcttggatggttaaagaacctgttttcctgcatcggcggtcctct
gttgccaagtctgcccctgaatttttggtgtacagtgaactgctatacacaaaacgacca
tatatacatggtgcaacaagtgtaaaatctgattggcttgttaaatatgccgggtctctc
tgcactttctctgcccccctcacagatcccaagccttattatgatcctctgacagaccaa
gttttctgttgggtcattccaacttttggccctcatctatggcagttcccattgcatggt
attccaattaaagatgatgtgcatagagtggctgtgtttgccttttctttgcttgaaggt
catgttttaccatgcttaagatctgtcaggaagttcatggcagcctcactgggtagcatt
ttgaggctagaggcatcaggtcatagaagggttgggaatcttctanacaagttaaagacc
aggttgagaattattgacagctgcaccactttaagagaggcctggaatgagaaccccaga
gaattgcatgcagaaattctggactggtttcaggagggttttagtggtcaatctgaagag
ctttggttggaaatgcaccgtgaggttcttttagatcccaaagaatgttttcccaaaagg
gtcaagagagataaaaaggagaaatacaggatttga
DBGET
integrated database retrieval system
