KEGG   Camellia sinensis (tea plant): 114305708
Entry
114305708         CDS       T07364                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 isoform X1
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
csin  Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:csin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csin04121]
    114305708
   03400 DNA repair and recombination proteins [BR:csin03400]
    114305708
Enzymes [BR:csin01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     114305708
Ubiquitin system [BR:csin04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    114305708
DNA repair and recombination proteins [BR:csin03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    114305708
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4 DEAD zf-RING_2 zf-C3HC4_3 ResIII zf-RING_5 zf-C3HC4_2 zf-ANAPC11 zf-rbx1 zf-RING_UBOX AAA_34 Prok-RING_4 MALT1_Ig Rad50_zn_hook CAA_C
Other DBs
NCBI-GeneID: 114305708
NCBI-ProteinID: XP_028106633
LinkDB
Position
Unknown
AA seq 981 aa
MEFEEDPVGFFMSLDCWPLSPPTQDEDDNNEDSSSSSQSSSETFMIGFLIVNIVGLQHYS
GTISGREMVGLVREPLNPFDENAIKVLNTRTIQVGHIERSVARVLAPLIDQNLISVEGIV
PNTPGRGNRYKIPVQIHIFAHQEAFSRVKSEILRGGLQLISNEDASFTLSESVVVKEKRS
IKDGKSLDDIFKLVDENVSKKSAMEALEPPKDVIKSDLFLHQKEGLGWLVHRENSCELPP
FWEEKDGAYVNVLTNYQTQMRPEPMRGGIFADDMGLGKTLTLLSLIAFDKFGAIRSSIDS
GRVDTERSEELDEENARLAVSGSKKAKRGSKNDTNSRKKKRTEDSHWNKLVKGKSVDGLD
RYGGASCVKSTLIVCPPSVFATWVTQLREHTRPGRLKVYMYYGERTQDAEELQKYDIVLT
TYSTLASEEHWSGTPMKKIEWWRVILDEAHVIKNVNAQQSRAVTSLNAKRRWVVTGTPIQ
NGSLDLFSLMAFLRFEPFSIKSYWNSLVQRPLAQGKVKGLSRLQVLMATISLRRTKDKDL
IGLPPKTIEICFVELSAEERELYDQMENEAKSVIENYIHANSVTSNYSTVLSLLLRLRQI
CTDIALCPADLRSFFPSNNIEDVSNNPELLRKMVSLLQDGEDLDCPICISPPNDIVITCC
AHIFCRSCILKTLKRTKPCCPLCRRSLSESDLFSSSLESSDTDNPKVSCSSTSSKVSALL
KLLSASRDQNPTTKSVVFSQFRKMLILLEEPLKAAGFKILRLDGSMNAKRRAQIIQEFEV
PAPDGPTILLASLKASGAGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVR
VIARNSIEERILELQEKKKTLAREAFGGRDPKDRKEISIDDLRTLMSLTLSRGGRLAVVK
QNMVSISWIRLTRLHIILSSLQPPRTIYGCGIDVLVIPLFICFNIYFLLFLPQIMCLTFN
VSLVNLANKHELLLLIVLIKV
NT seq 2946 nt   +upstreamnt  +downstreamnt
atggagttcgaagaagacccagttggtttcttcatgagtctcgattgttggcctctatct
ccgccgacccaagacgaagacgacaacaacgaagactcctcttcttcttctcagtcttcc
tccgagaccttcatgattggtttcttaatcgtcaacatcgtcggtctacaacactactcc
ggcacgatcagtggccgagaaatggtgggtctggttcgcgaacccctcaatcctttcgac
gagaacgcaatcaaagtgctcaacactcggaccattcaagtgggtcacatcgaacgctcc
gtagccagggtcctcgcgcctttgatcgatcagaatttgatatctgttgaaggaatcgtc
cccaacactcccggaagaggcaaccggtacaagattcccgtacaaattcacatttttgct
caccaggaggcattttcccgagtcaaatcggagattttgcgaggtgggttgcagttgatt
tcgaacgaggatgcgtcttttactctatctgaatcggttgtggtcaaggagaagaggagc
attaaggatgggaagagtttggatgatatattcaaattggtggatgagaatgtgagtaaa
aagtctgcaatggaggctttggagccacccaaagatgttatcaaatcggatctttttttg
catcagaaggaaggtttggggtggttggttcacagggagaattcctgcgaattgccacct
ttttgggaagagaaagatggggcttatgtcaatgtgttgactaactatcagacccaaatg
cgtcccgaaccaatgcgcggtggaatcttcgcggacgacatgggattgggtaaaactctc
actttgctttctttgattgcttttgataagtttggtgccattcggtcttcaattgatagt
ggtagagtagatacagaacgaagtgaggaattagatgaagagaatgctagactggctgtt
tcgggtagtaagaaggcgaaaagggggagtaaaaatgatactaattcacggaagaaaaaa
agaactgaagatagccattggaataaattggtgaaaggaaaatctgtggatggattagat
agatatggtggtgcttcatgtgtgaaatcgacattgattgtgtgtccaccatctgtattt
gcaacgtgggtaacacaattaagagagcacacaagaccaggaaggttgaaggtgtatatg
tattatggagaacggactcaggatgcggaggagcttcagaagtatgatatagttttgaca
acttatagtactctagccagtgaagaacattggtcaggaacacctatgaagaagatagag
tggtggcgagtcattttggacgaggcacatgtgattaagaatgtcaatgctcagcaaagc
cgtgctgtcactagcctgaatgctaagaggaggtgggttgttacggggacacccatacaa
aatgggtcattggacttgttctcactcatggcatttttgaggtttgagccattctcgatt
aaaagctattggaatagcttggttcagaggccgcttgctcagggtaaagtcaaagggctc
tcgcggttgcaggttctaatggcaaccatttctttgaggagaacaaaagataaggattta
attggattgccacctaaaactattgagatttgttttgtggagctttctgctgaagaacgt
gagttgtatgatcagatggaaaatgaagccaagagtgttattgagaactatatccatgct
aatagtgtgactagcaattactcaactgtgcttagcctacttttacggcttcgtcaaatt
tgtacagatatagccttgtgcccggcagatttgagatcattttttccatctaacaatatt
gaagatgtatccaacaatcccgaactgctgagaaagatggtttctttgctgcaagatgga
gaggacttggactgcccaatttgtatttctccaccaaatgatattgttattacatgttgt
gctcacatcttttgtcgatcctgcatcttaaaaaccctcaaacggactaaaccctgctgc
ccattatgccgccgttcattgtcagagtctgacctcttctcctcctcactggaatcctct
gacacagacaaccccaaagtttcctgttctagtacatcttccaaggtgtctgctctctta
aaacttctttcagcatcaagggatcaaaacccaactacaaaatcagttgttttctcacaa
ttccggaaaatgttgattttgcttgaagagccgctaaaagcagctggttttaagattctg
cgcttggatggctcgatgaatgcaaaaaggagggctcagataatacaagaatttgaagtc
ccagcaccagatggacctacaattttactggcaagtctaaaagcttcaggtgctggaata
aatcttacagctgcttctcgggtctacttgctggagccatggtggaacccggcagttgag
gagcaggctatggaccgggtccaccggattgggcagaaggaggatgtgaagattgtgagg
gtgattgctcgaaatagcattgaagagaggatattggaattgcaagagaaaaagaagaca
cttgctagagaagcttttggtgggagagacccaaaggataggaaggagattagcatagat
gatctccgaactctcatgtccttgaccttatcacgaggaggacgattggcagtggtaaag
cagaacatggtctctatatcttggatcaggctgacaaggttgcacatcattctatctagt
ctccaaccaccaaggacgatttatggctgtggcatcgacgtcttggtcatccctcttttt
atctgcttcaacatttatttccttctgtttttaccacaaataatgtgtctgactttcaat
gtgagtcttgtcaacttggcaaacaaacacgagcttcttttgctcatcgtattaataaaa
gtgtag

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