Camellia sinensis (tea plant): 114306398
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Entry
114306398 CDS
T07364
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114306398
03041 Spliceosome [BR:
csin03041
]
114306398
03036 Chromosome and associated proteins [BR:
csin03036
]
114306398
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114306398
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114306398
mRNA cycle factors
Common to processing body (P body) and stress granule
114306398
Spliceosome [BR:
csin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
114306398
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
114306398
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
114306398
NCBI-ProteinID:
XP_028107431
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSTSWADSVAADNNAASGSSNINGTGVASRPVRSTYVPPHLRNRPPTSEPPFSSHSAPPS
DNDRIGYGGSTSGSRPGGSRPDYGRQGYGSGGRGGGGWNSRGGGWDRGREREVNPFGNDD
VNEEAERAFDEQESTGINFDAYEDIPVETSGENVAPPVNTFAEIDLGEALNLNIRRCKYV
KPTPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIIRGQFERPRGYRTVYPLAL
ILSPTRELSMQIHEEARKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL
LERARVSLEMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPAPGLRQTLLFSATFPKEIQ
RLASDFLSNYIFLAVGRVGSSTDLIVQRVEFVHDSDKRSHLMDLLHAQMTNGIHGKQSLT
LVFVETKKGADALEHWLYTSGFHATTIHGDRTQQEREQALRSFKSGNTPILVATDVAARG
LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNLSLAKPLADLMQESN
QEVPTWLTRYASRVSYGGGKNRRSGGGRFGGRDFRREGSFSRGGGGSSGGYGVSGSYVGG
YGSGATSAWD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcatgggctgattctgttgctgctgataataatgcagcttctggttcctcg
aatattaatgggacaggagttgcttcccgtccggtcaggtctacttatgtaccaccacat
cttcgaaacagaccgcccacgtcagagccaccattttcatcacatagtgccccaccatca
gataatgacaggattggctatggtggatccacaagtgggtcaagaccaggaggttctagg
cctgattatgggcgccaaggatatggtagtggtggtcgaggaggtggtggttggaacagc
agaggtgggggatgggatcgtgggagggagcgcgaggtaaacccttttggtaatgatgat
gttaatgaggaggcagagcgtgcatttgatgagcaggaaagtactggtatcaactttgat
gcttatgaggatattccagtggagacaagtggggaaaatgtggcccctcctgtgaataca
tttgcagagatagatttgggggaggccctgaacctaaatattcggaggtgcaaatatgtg
aaaccaactcctgtgcagcgtcatgcaattcccatttcccttgcgggtagagatttgatg
gcttgtgctcagactggttcaggcaagacagctgctttttgcttcccaattattagtgga
attataaggggtcagtttgagaggccacgaggataccggactgtgtaccctcttgcgctc
attctgtctcctacaagggagctctccatgcagatacatgaggaagctcgaaagttctct
tatcaaactggggtgaaggtggtagttgcttatggaggagcaccaatcaaccaacagttg
cgagagcttgagagaggagttgatattcttgtggcaactcctgggcggttagttgatttg
cttgagagagcaagagtgtcattggagatgattagatatttggctcttgatgaagcagat
cgaatgttggatatgggatttgagccacaaatcagaaagattgtggaacaaatggatatg
cctgcaccagggttacgacagacactgctatttagtgcaacctttccgaaggagatccag
agactagcatctgatttcctttcaaactacatattcttagctgttggaagagttggttca
agtactgatttgattgttcaaagagttgaatttgttcatgactctgacaagagaagccac
ctcatggaccttcttcatgcacaaatgactaacggcattcatggcaagcaatctctgact
ttggtatttgtggaaacaaagaagggagctgacgcattggaacattggttgtatactagt
gggtttcatgccactactattcatggagataggacacagcaggaaagagaacaagcattg
agatcatttaagagtggaaatacaccgattttagttgctacagatgttgcagcacgcgga
ctcgatattcctcatgttgctcatgtggtcaactttgacctccccaacgacattgatgat
tatgtacaccggataggacggacagggcgagctggcaagacaggattggcaactgctttc
tttaatgagaacaatttatcattggcaaagccactagctgatctgatgcaagaatctaat
caagaggtacccacttggctcacccggtatgcaagtcgggtttcttatggaggggggaaa
aataggcggtctggtggaggacgttttggtggccgtgacttccgaagagaaggctctttt
agtaggggtggaggtggaagtagtggtggttatggggtttctggtagttatgttggtgga
tatggttctggagcgaccagtgcttgggattag
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integrated database retrieval system
