Camellia sinensis (tea plant): 114306547 Help Entry 114306547         CDS       T07364                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism csin  Camellia sinensis (tea plant) Pathway csin04120   Ubiquitin mediated proteolysis csin04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:csin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     114306547  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     114306547  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:csin04121]     114306547 Enzymes [BR:csin01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      114306547 Ubiquitin system [BR:csin04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     114306547   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      114306547 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_TEP1_C EIF3I zf-C3HC4_2 WD40_MABP1-WDR62_2nd Beta-prop_HPS5 WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_RFWD3 zf-C3HC4 WD40_like zf-C3HC4_3 zf-RING_UBOX zf-RING_2 Beta-prop_WDR75_1st Beta-prop_SCAP zf-C3HC4_4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 U-box DUF1664 zf-RING_5 Baculo_p24 Beta-prop_IFT122_2nd YpoC zf-Nse Motif Other DBs NCBI-GeneID:  114306547 NCBI-ProteinID:  XP_028107621 LinkDB All DBs Position Unknown AA seq 675 aa AA seqDB search MDEGSTGALVPAVKGEVKPFSAVAPAESGGATATETAEVPADELDRDLLCPICMQIIKDA FLTACGHSFCYMCIITHLHNKKDCPCCGHYLTNNQLFPNFLLDKLLKKTSARQISKTASP VEQFRQAMQQGCEVSVKELDTLLTLLAEKKRKLEQEEAERNMQILFDFLYCLRKQKVDEL NEIQNDLQFIKEDINAVERHRIELYRARDRYSVKLRMLSDDPTATKSWPSPFAKNNSGFM SSSRNAQGGLGMGNFLYKKADGKAQVNTLASQAKDTLSGMGSEHVSQSSLAVARKKRVHA QFNDLQECYLQKRRQLANHPLKQEERDTNIIHREGYTAGLTEFQSVLSTFTRYSRLRVIA ELRHGDLFHSANIVSSIEFDRDDELFATAGVSRRIKIFDFSSVVNEPADVHTPVVEMSTR SKLSCLSWNKFTKNHIASSDYDGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLV SGSDDCKVKLWCTKQEASVLNINMKANICCVKYNPGSSSHIAVGSADHHIHYYDLRNASQ PLHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLTV NSGYIACGSETNEVFVYHKAISRQVTRHKFGSQEMDDTDEDAGSYFISAVCWKSDSPTML AANSQGTIKVLVLAT NT seq 2028 nt NT seq  +upstreamnt  +downstreamnt atggacgagggatcaacgggggcactcgtgccggcggtgaagggggaagtcaagcctttc tccgccgtcgctccggcggaatccggtggcgccaccgccacagaaacggcggaggtacca gcagatgagcttgaccgtgatttgttgtgcccgatttgcatgcagataatcaaggacgcg ttcctcacggcgtgtggacacagcttctgctacatgtgcatcatcactcaccttcacaac aaaaaggattgcccttgttgtggacattacctgactaataatcaactcttccccaatttc ctcctcgacaagctattgaagaagacctctgctcgccaaatatcaaaaactgcatcccct gtagaacaatttcgtcaggcaatgcaacagggttgtgaagtgtcggttaaagagctggac accctgttgacgctgcttgcagagaaaaagagaaaattggagcaagaagaagccgagaga aatatgcaaatcctatttgacttcttgtactgcctaaggaaacagaaggttgatgaacta aatgagatacaaaatgatctccagtttatcaaagaggacataaatgctgtggagagacat agaatagagttgtatcgggcaagggacaggtattcagtgaagctgcggatgctttctgat gatcctacagcaacaaaatcttggccttcaccatttgctaagaataatagcggctttatg tctagttctcgtaatgcacaaggagggctgggtatgggaaattttctgtacaagaaagca gatgggaaggctcaagtaaacacccttgcttcccaggcaaaggataccttgagtggaatg ggttcagaacatgtgagtcaatcgagtcttgctgtagcaaggaaaaagcgcgtccatgct cagttcaatgacctacaagagtgttacttacaaaagcgacggcagttggcaaaccaccca cttaagcaggaagaaagggatacaaatatcatacatagagaaggttatactgcaggacta actgagtttcaatctgtgctgagtaccttcacacggtacagtcgactaagggtcatcgct gaacttaggcatggggatctttttcattcggccaatattgtatcaagcatagaatttgac cgtgacgatgagttgtttgctactgctggagtttcgagacgtataaagatttttgacttc tcttcggttgtaaatgaacctgcagatgtgcacacccctgttgtggagatgtcaacacga tcaaaacttagttgcttgagttggaacaagtttactaagaaccatattgctagtagtgat tatgatggaatagtaactgtttgggatgtcaccacgaggcagagtgtaatggaatacgag gaacatgagaaacgggcatggagtgttgatttttcacgcacagaaccctctatgcttgtc tctggcagtgatgattgcaaggtcaaactatggtgcacaaagcaggaagctagtgttctt aacatcaacatgaaagcgaacatttgctgtgtcaagtacaatcctggatctagcagtcac attgcggttggctctgcagaccatcatatccactattatgatttgagaaatgctagccag ccgctccatgtgttcagtggacataggaaagctgtttcgtatgtgaaatttttatccaat gatgagcttgcgtctgcatctactgacagtacattacgtttgtgggatgtgaaggagaat ttgccggttcgtacctttaggggccatacaaatgaaaagaattttgtgggtcttacggta aacagcggttatattgcttgtggcagtgaaacaaatgaagtatttgtttatcataaggca atctcaagacaggtgactcggcataaatttggttcacaggagatggatgatactgatgaa gatgccggatcttatttcattagtgctgtatgctggaagagtgatagcccgacaatgttg gctgcaaacagtcagggaacaattaaagtgctggtactagcaacgtga

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