Camellia sinensis (tea plant): 114306772
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Entry
114306772 CDS
T07364
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
csin03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114306772
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
114306772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114306772
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
114306772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
114306772
NCBI-ProteinID:
XP_028107863
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDPTAEEQLDYGDEEFVGAQKMQYQGGGAISALADDIIGEDDEYDDLYNDVNVGEGFLQL
QRSEAPVPSPGVGNGGFQAQKTNLPEPRAEAAGAQQLSVHGVATEGKYSNSGIHFTEPKD
GLTADREQLGTTDIAQTGRVHGMTHDTQPANLGFQGSTPMPQKIGVDSTKMSVKLAAESA
SLLNSGTGGPRSVPQISANQMGMNVNANANANVNRPMVNENLIRPALENGGTMIFVGELH
WWTTDAEIESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDAIAAAACKEGMNGHIFNG
RACVVAFASPQTIKQMASSYMNKNQVQPQSQTQGRRPMNDGVGRGGGMNQPSGDGGRNYG
RGGWGGRGGQGILNNRGPGGGPMRGRGGPMGAKNMIGSTSGVGIGGSGGGYGQGLAGPAF
GGPPGGLMHPQGMMGAGFDPTYMGRGAGYGGFSGPPFPGMLPSFPAVNAMGLAGVAPHVN
PAFFGRGMAANGMGMMGPTGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGEDGASEY
GYGEASHEKGVRSNAASREKEWGSERDWSGNSEKRHRDEREVERDRSDREHRYREEKDGY
RNPRQREQDLGYEDDWDRGQSSSRSRSRSKAMPEEDHRRSRDVDYGKRRRLPSE
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggatccgacagctgaagagcaattagattatggagatgaggaatttgtaggggctcaa
aagatgcagtatcagggaggtggagcgatttctgctcttgcagatgatataataggtgaa
gatgatgaatatgatgatctatataatgatgttaatgttggagaaggtttcttgcagctg
cagcgttcagaggcaccagtgccatctcctggtgtgggtaatgggggatttcaagcacag
aaaactaatcttcctgaacctagagctgaagctgcaggggcacaacagctaagcgtccac
ggggttgcaactgaagggaagtactcgaattctgggatccattttactgagccgaaggat
gggttgacagctgatagggaacaactaggaactactgatattgcgcaaacgggaagggtt
cacgggatgactcatgatactcaacctgcaaatttgggctttcaaggatcaactccaatg
cctcagaaaattggggttgattctactaaaatgtcagtaaagttggccgctgagtctgct
tcgctgctgaactctggtacaggcggccctagaagtgttccacagatatcagctaatcag
atgggtatgaatgtaaatgcaaatgcaaatgcaaatgtgaaccgtccaatggttaatgaa
aatctgattcggcctgctttggagaatggcggaaccatgatctttgtgggagaactgcat
tggtggactactgatgcggagattgagagtgtgctatcccaatatgggagggtcaaggag
attaagttctttgatgagagagctagtggaaaatcaaaaggctattgtcaagttgaattt
tatgatgcaattgctgcagctgcgtgcaaagaaggaatgaatggtcatatttttaatggg
cgagcttgtgtagtggcctttgcttctccacaaaccataaagcagatggcttcttcttat
atgaacaaaaaccaagtccagcctcagtctcagacacagggaaggaggcctatgaatgat
ggggtggggagaggtggtgggatgaatcaacctagtggagatggagggaggaattatgga
agaggtgggtgggggggacgaggtgggcagggaatactcaataatagaggccctgggggt
ggacctatgaggggaagaggagggcctatgggggcaaagaatatgattggaagcacttct
ggtgtcggaattggtggtagtggaggagggtatgggcaaggccttgcgggtcctgctttt
ggtggtcctcctggtggtttgatgcatcctcagggtatgatgggtgctggatttgaccca
acttatatgggtagaggagctggctatggagggttttcgggtccccctttccctgggatg
cttccttcatttccagctgttaatgcaatgggacttgctggggtggctcctcatgtgaac
cctgcattctttggcagaggaatggcagctaatggaatgggaatgatggggcccactggg
atggatggacatcatgcaggaatgtggacagacacgagcatgggtggatggggaggggaa
gaacatggccggaggacaagagaatcgagctatggtggtgaagatggtgcttctgaatat
ggatatggagaggcaagccacgaaaaaggagtaagatcaaatgctgcttcccgggagaag
gaatggggttctgaacgtgattggtcaggaaactctgagaaaaggcatcgtgatgagagg
gaggtggaaagggacagatctgatagggaacacaggtacagggaggagaaggatggttac
cgaaaccctcggcaaagagaacaagacttgggctatgaggatgactgggatagaggacag
tcttcttcaagatctcggagccggtccaaagcgatgccagaagaggatcacaggagatca
agggatgtggattatgggaagcgcagacgcctgccatcagagtga
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