Camellia sinensis (tea plant): 114306940
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Entry
114306940 CDS
T07364
Name
(RefSeq) polyadenylate-binding protein 7-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114306940
09123 Folding, sorting and degradation
03018 RNA degradation
114306940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114306940
03041 Spliceosome [BR:
csin03041
]
114306940
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
114306940
mRNA cycle factors
Stress granule specific factors
114306940
Spliceosome [BR:
csin03041
]
Complex C
Other components
Complex C specific factors
114306940
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_10
RRM_RdRP1_2
Nup35_RRM_2
RRM_ACIN1
RRM_11
RPAP3_C
GNAT_acetyltran
Motif
Other DBs
NCBI-GeneID:
114306940
NCBI-ProteinID:
XP_028108068
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MAVPPTVPAAPASLYVGDLHHDVTDGQLFDHFSEFKSLASVRVCRDSSTGRSLCYGYVNF
ISPQDAIRAIEMKNHSLLNGKVIRVMWSLRDPDARKSGIGNVFVKNLGESIDNGKLQEMF
EKIGTILSCKVVMSDDGKSKGYGFVQFDSEESANAAIEKYNGFSIGGKQMYVGKFVKKSD
RILPSPDAKYTNLYFKNLDPDVTEEIFKEKFSVFGKIVSLVITKDDNGASRGFGFVNFDN
PDDARRALEAMNGSQLVGSKVLYVARAQKKAEREQILRRHFEEKRKEQILKYQGSNVYVK
NIDDDVTEDELREHFRQCGTITSAKLMRDDKGISRGFGFVCFSKPEEANKAVNTFHAYMF
HRKPLYVAIAQRKEERHAQLQIQYAQHIAGLAGPSTVIPGGYPPFYYTGPPSVVSQVPPQ
PGLMYQPLGLRPFWRANGFAPPTRPGFQPSPLPVISNSPRQHRQNRGRMNGHMPPQGGVH
SVSYVPHVQLPSQSMNSSSKDSSNQQRTGQARYVPNGRVREMNKGSAVSSAVSNSIGSGS
EGSEMLSSRLAAASPEQQKQILGERLYPLVQKHKSDLAAKITGMLLEMDNSELLLLLESP
ESLATKVEEAVQVLKLSKTKVSGQDSRHPTSYLSAEVAVN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcctccgacggtccccgccgctccggcgtctctgtacgtcggcgacctacac
catgacgtcacagacggtcagcttttcgatcacttctccgaattcaagagcctcgcctct
gttcgcgtctgtcgcgactcttccaccggacgatccctctgttacggttacgtcaacttc
atctctcctcaagacgcaatacgtgctattgagatgaagaatcactctctgctgaatgga
aaagtgataagggttatgtggtcgcttcgtgatcctgatgcaaggaagagtggaattgga
aacgtatttgtcaagaatttgggtgagtcgattgataatgggaagctgcaagaaatgttt
gaaaaaattggcactattttgtcttgcaaagtagtcatgtctgacgatgggaagagcaaa
ggatatggctttgtccagttcgattctgaggaatctgcaaatgctgctattgaaaagtat
aatggattcagtattggagggaagcaaatgtatgtaggaaagtttgtgaaaaagagtgat
cggattttacccagtcccgatgctaaatatacaaatctctacttcaagaatttggatcca
gatgtcacagaagaaatttttaaggagaagttctctgtgtttgggaaaattgttagctta
gttatcacaaaggatgacaatggggcctcaagaggctttggatttgtgaatttcgataac
ccagatgatgctaggcgggcattggaagctatgaacgggtcacaacttgtaggctccaag
gttctctatgtagctagagcacagaagaaagcagaacgtgagcagattttgcgccgtcat
tttgaggagaaacggaaggagcaaatcttgaaataccagggttcaaacgtctatgtcaag
aatattgatgatgatgtcactgaagacgagctgcgagagcacttcagacagtgtggcaca
atcacctctgcaaaacttatgcgagatgacaaaggaattagtagggggtttgggtttgtc
tgcttctctaaacctgaggaagccaacaaagctgtgaatacttttcatgcatacatgttt
cacagaaagccattatatgtggctattgctcaaaggaaagaggagaggcatgcccaatta
cagattcagtatgcgcagcacatagcaggactagcaggaccttcaactgttatccccggc
ggatatcctcctttttattacacaggtcctcctagtgttgtttcacaagtacctccacaa
cctgggcttatgtatcagcctctaggattgaggccattttggagagctaatggctttgca
cctccaaccagacctggttttcagccgtcaccactcccagtgatttctaactctccaaga
cagcataggcaaaacaggggaaggatgaacgggcatatgcctccacaaggtggtgttcat
agtgtttcttatgttccacatgtgcaactgccctcccagtcaatgaactcatcatcaaaa
gattcaagcaatcaacagcggactgggcaagcaaggtatgtgccaaatggacgtgtgcgc
gagatgaacaaaggatccgcagtctcatctgctgtttccaattctattggatctgggtct
gaggggtcagagatgttgagcagcaggcttgctgccgcttcccctgagcagcaaaaacag
attcttggagagcgactctaccctcttgttcagaaacataagtctgatcttgctgcaaaa
ataaccgggatgcttttggagatggacaactcagaattgcttctgttattggagtcaccc
gagtcactggctactaaagtggaggaagctgtgcaggtactcaagctctcaaagacaaaa
gtttccggccaagactcacgtcatcctactagctacctatccgctgaggttgcagttaac
tga
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