Camellia sinensis (tea plant): 114307320
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Entry
114307320 CDS
T07364
Name
(RefSeq) poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114307320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114307320
Enzymes [BR:
csin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
114307320
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114307320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
114307320
NCBI-ProteinID:
XP_028108510
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MKKQWLVRALSETLTLASTTTSSFTRSLCSSTSSSSSTSSSSSSSFALKNVTKSNFESAL
SDLRRLVRDADFVSIDLEMTGVTSAPWRDSFEFDRFDIRYLKVKDSAEKFAVVQFGVCPF
RWDSSKQSFIAHPHNFYIFPRQEIPVGGPSYEFLCQTTSIDFLAKYQFDFNQCIHEGISY
LSRGQQDEALRHLQMRYEDDLSELYLREARDTALVRIADVLFTERMKNRISEWREGLLQS
RNSGSKFQESTNDFSQQFQTIFFKMRPALLLNGFTSHQLRLIQLVTVKHFENLVYIRVKG
ESSSVQQLIVYTESNNDRGLLMKEVKDGLRKEEEMKIEAAVGFRHVIDLLSSEQKLIVGH
NCFLDIAHMYSKFLGSLPSTAEEYVSSVHKYFPYIIDTKVLLNANDVLRAMMKKGSTSLS
KAFAFLCSEIASSVKGSRFGLKPHVNVEVQVDDMRSSNWNSGAKHEAGYDAFMTGCVFAQ
VCSHLGFNFKLHPPFTNLTHDEKLQKHINLLYLSWINSDIIDLRTGKQTAESSYNSLKFR
YPKIVFSNICLIWGFPSKLKAREIRECVSKVFGPSSVSSIYHLDETAVFVQFSKEEYVSV
FLELKETLERNNDPISVLHPLSKLLEGGNTRAASYEFYKEICSSSISKVLFADQAESIGI
KWKTKLLGENEMASFRNSTDESESGKMNSVIDDLSCSHFLVDLC
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaacaatggctggttagggcactttccgaaaccctaaccctagcttccaccacc
acctcttcattcactcgctcactctgctcttcaacatcttcatcttcatctacatcttca
tcttcatcttcatctttcgctctaaaaaatgtcacgaaatcgaacttcgaatcggcactc
agcgacctccgacgcctcgtcagagacgcagacttcgtgtcgatcgacctcgagatgacc
ggcgttacgagcgctccatggagagactccttcgagttcgatcgcttcgacattcgttat
ctcaaagtcaaagattcggcagagaagttcgctgttgttcagtttggtgtttgtcccttc
cgttgggactcttccaagcaatccttcattgctcacccgcacaatttttatatatttcca
cgtcaagaaattccagttggtggcccctcctatgagttcctatgccaaacaacctcaatt
gacttcttggctaaataccagtttgatttcaatcaatgcatacatgaaggaatatcttat
ttatccagaggacaacaggatgaagcactaaggcacttacaaatgaggtatgaggacgat
ttgtcagaattgtacttgagagaagctagagatacagcgttagttagaattgcagatgtt
ctcttcactgagagaatgaagaacagaatcagtgagtggcgtgagggattattacagagt
agaaatagcgggtctaaatttcaggaaagtacaaatgacttcagtcaacaatttcaaacc
atcttcttcaagatgcgcccagctcttttgctgaatgggttcacctctcaccagctaagg
ttgattcagttggttactgtgaagcattttgaaaaccttgtttacattcgtgtaaagggt
gaatcttcctctgtacaacaattaattgtgtacactgaatcaaacaatgacaggggctta
cttatgaaagaagtcaaggatgggcttcgcaaggaagaagagatgaagatcgaagctgcg
gttggatttcggcatgttattgatctcctttcctcagagcagaagttgatagttggtcac
aattgctttcttgatattgcgcacatgtatagcaaatttttaggttctcttccttcgact
gctgaagaatacgtctcttctgttcacaaatactttccatacatcattgacacaaaagta
cttttaaatgcaaatgatgtacttagagctatgatgaagaagggcagcacatcactgtcc
aaagcatttgccttcttgtgttcagaaattgcttcgagtgtcaaaggatctagattcggt
ctcaagccacatgttaacgtcgaggttcaagtggatgacatgaggtcctcaaactggaac
tctggagctaagcatgaagctggctatgatgcttttatgacgggttgtgtttttgcccaa
gtatgcagtcatcttgggttcaatttcaagcttcatccacccttcactaatttgacccat
gatgagaagctccaaaagcacattaatcttctttatttaagctggattaacagtgacatt
attgatctgaggactggtaagcagactgcagagtcttcatataacagcctaaaatttagg
tatccgaagattgtcttttcaaatatttgtttaatttggggatttccatccaaactcaag
gcaagggagattagggaatgcgtctctaaagtctttggcccaagctcggtttcttccatc
tatcacttagatgaaactgctgtgtttgttcagtttagtaaagaagaatatgtctctgtt
tttctggagttgaaggaaaccttggaaagaaacaatgatccaatctctgttttgcatccg
ctctcgaaactcctggaaggtggaaacactcgagcggccagttatgagttctataaagag
atttgcagttcatcgatttcgaaagtattgtttgctgatcaggcagagtcaattggtatt
aaatggaagaccaaattgttgggagaaaatgaaatggcttcttttcgaaattctaccgac
gaaagtgagtcgggaaagatgaacagtgtgatagatgatctatcgtgcagccatttcttg
gttgacctttgctag
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