Camellia sinensis (tea plant): 114307942
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Entry
114307942 CDS
T07364
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04120
Ubiquitin mediated proteolysis
csin04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114307942
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
114307942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csin04121
]
114307942
Enzymes [BR:
csin01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114307942
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114307942
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
114307942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
zf-C3HC4_2
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
zf-C3HC4
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_EML
zf-C3HC4_3
Beta-prop_WDR75_1st
zf-RING_2
WD40_like
zf-C3HC4_4
zf-RING_UBOX
Beta-prop_DCAF12
Beta-prop_SCAP
U-box
Beta-prop_IFT140_1st
Beta-prop_IFT122_2nd
YbfN
zf-RING_5
DUF1664
UCH
zf-RING_6
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
114307942
NCBI-ProteinID:
XP_028109228
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
MGDSSMGVLVPSVKSEPMSSDAVAAPLPPPETTAAAAELDKDFLCPICMQIIKDAFLTAC
GHSFCYMCIVTHLRNKSDCPCCSHYLTTNHLFPNFLLNKLLKETSARQIAKTASPFKQLH
HALQQGCDVSVKELDSLLTLLEEKKRKIEQEEAETNMQILLDFLHCLRKQKLEELNEIQT
DLQYIKEDINAVERHRIDLYRAKERYSVKLRMLLDDPSATKAWPSLMDRRRCGILSSIPP
SPQGLCWMNEGNSQNRKVDGKALVSSQMVQRKDSYSGPDSHVTQSGLAVARKRRVHAQFN
DLQECYLQRRRHWVRQSYKQEERDTNAMNREGYHAGLEDFQSVLSTFTRYSRLRVVAELR
HGDLFHSANIVSSIEFDRDDELFATAGVSRRIKVFEFSSLVNESVDVQFPVVEMSTRSKL
SCLSWSKCTKNHIASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGS
DDCKVKIWCTNQEASVLDIDMKANICSVKYNPGSSFYVAVGSADHHVHYYDLRNVSQPLH
VFSGHRKAVSYVKFLSSNELASASTDSTLRLWDVKENLPLRTFRGHTNEKNFVGLTVNSE
YIACGSETNDVFVYHKAISRPAAWHRFASSDLDDVDDDAGSYFISAVCWKSDSPTMLAAN
SQGTIKALVLAA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagctcaatgggggtgctggtgccctccgtcaagtcggaaccgatgtcctcc
gacgccgtcgccgctccactccctccgccggagacgacggcggcggcggcggagctggac
aaggacttcttgtgtccgatatgcatgcagatcatcaaggacgcgtttttgacagcttgt
ggacacagcttttgttacatgtgcattgtgactcaccttcggaacaagagcgattgtcct
tgttgcagtcactacctcaccaccaaccatctcttccctaatttcctcctcaataagtta
ttgaaggagacttctgctcgtcaaatagcaaaaactgctagtccttttaaacaacttcat
catgcattgcaacagggttgtgatgtgtcagttaaggagctagacagtctcttgactctg
cttgaagagaaaaagagaaaaatagaacaagaagaagctgagacaaatatgcagattctc
ctagactttttgcattgcctaaggaagcaaaagcttgaagagctcaatgagatacaaact
gatctccagtacattaaggaggacataaacgctgtggagagacatagaatagacttatat
cgggcaaaagagagatattcagtaaaactgaggatgcttttagatgatccttctgcaacg
aaagcatggccatcattgatggatagacgtagatgtggcatcctttctagtatccccccc
agtccacagggcctatgctggatgaatgaaggcaattcacagaacaggaaagttgatgga
aaggctcttgtaagctctcaaatggtgcaaagaaaggattcttacagtgggccagattca
catgttactcaatcagggcttgcagtagcacggaaaaggagggtccatgcacagttcaat
gacttacaagagtgttacttacaaaggcgacggcattgggtccgacagtcgtacaaacag
gaagaaagggacacaaatgccatgaatagagaaggttatcatgcaggacttgaggatttc
cagtctgtgctgtctacctttacacgatacagccgattgagggtcgttgctgaacttagg
catggagatctttttcactcggccaatattgtatcaagtatagaatttgatcgagatgat
gaattgtttgctactgctggagtttcaaggcgcatcaaggtttttgaattttcatcgttg
gtgaatgaatcagtagatgtgcaatttcctgttgtggaaatgtccacacgctctaaactt
agttgcttaagctggagtaagtgcacgaaaaaccatatagccagtagtgattatgaggga
atagtgactgtttgggatgtaactactcgtcagagtgtgatggagtacgaggagcatgaa
aaacgagcatggagtgtagatttttcacgcactgaaccttcaatgcttgtatccgggagt
gacgactgcaaggtcaaaatttggtgcacaaatcaggaagcaagtgttcttgatattgac
atgaaagcaaatatatgttctgtcaagtataatccgggatctagcttttatgttgcagtg
ggttctgcagatcatcacgttcactattatgacttgagaaatgttagccaaccgctgcat
gttttcagtggacatcgaaaagctgtttcatatgtaaaattcctgtccagcaatgaactt
gcttctgcatctactgacagcacattgcgattatgggatgttaaagaaaatctgcccctg
cgcacttttagaggccacacgaatgagaagaattttgtcggtctcacggtaaacagcgaa
tacattgcttgcggcagtgaaacaaatgacgtttttgtctatcacaaggctatttctagg
cctgcagcttggcataggtttgcttcttcagatttggatgatgttgacgatgatgcagga
tcatatttcattagtgctgtatgttggaaaagtgacagtccaacaatgctagctgccaat
agtcaaggaacaattaaagctcttgtacttgctgcttga
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