Camellia sinensis (tea plant): 114308141 Help Entry 114308141         CDS       T07364                                  Name (RefSeq) dicer-like protein 4 isoform X1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism csin  Camellia sinensis (tea plant) Brite KEGG Orthology (KO) [BR:csin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:csin03036]     114308141 Chromosome and associated proteins [BR:csin03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     114308141    microRNA pathway     RISC loading complex      114308141 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Ribonuclease_3 Dicer_dimer Ribonucleas_3_3 DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21 Motif Other DBs NCBI-GeneID:  114308141 NCBI-ProteinID:  XP_028109439 LinkDB All DBs Position Unknown AA seq 1624 aa AA seqDB search MEGGDGGASIALSISEQFSTLSVGSGEESSGDDQNTEKDPRKIARRYQIDLCQKALEENI IVYLETGCGKTHIAVLLMYEMRHLIKKPQKNICVFLAPTVALVQQQAKVIQDSTGFKVGM YCGSSKRLKYHHDWEKELENYEVFVMTPQILLRNLSHCFIRIESIALLIFDECHYAQLDS NHPYAEIMKVFYKNDVTKVPRIFGMTASPKLGKGASINTLETLLRAKVYSVEDKEELEQF VSSPIVNIYYYGPSVIGSSCPHMIYYSKLEEIKRQCVSTLSGKTDDHGSLKSIKKMLQRE HNNLIFSLENLGLWGAFQACRIHLKSGHSERNEMIEAGNAGDDSLCNRYFTQAASLFACD CVKDGNEADLSGVEVLKEPLLSKKLLRLVGILSNFRLQPNMKCIVFVNRIVIARALSYIL QNLKFLSSWKCDFLVGVHSGLKSMSRKIMNTILEKFRSGELNLLVATKVGEEGLDIQTCC LVIRFDLPETVASFIQSRGRARMPQSEYAFLVDRGNERERNLILNFKKDEDKMNEEIASR KSSVTIVEFEERTYKVTSTGATISSGSSVSLLHHYCSKLPHDEYFNPKPEFFYFDDVEGT VCHIILPSNAPIHQIVSSPQSSTEAAKKDACLKVCKELHELGALTDYLLPDHDDGNEELE QEFSDSDSCDDEPSRRELHEMLVPEALKEPWTDLENPVCLNSYFIKFSPQPADRSYKNFG IFVKTPLPGEADRMKLDLCLARGRSVMTELIPSGVSKFDKDGILQVQKFQEMFLKVILDR SEFIPEFVSLGKNGFSNLGSSTFYLLLPVILYGNKMTVDWKLIRRCLSSPIFRNPEDARD SVLPHLNDHLELANGPHHIDDVINSLVYAPCKDIFFFISDVVRARNGYSEFKGSMSHIEH YNKTNGIHLSYPDQPLLKAKQLFCLDNLLRKGGNSESREKEEHFVELPPEICQLKVVGFS KEIGSSLSLLPSIIHRLESLLVAIELRDRLSASFPEGTEVTAYRVLEALTTEKCNERFSL ERLEVLGDAFLKFAVGRHLFLLYDALDEGQLTRKRSNIVNNSNLFRLATVSKLQAYIRDQ SFDPGQFFALGRPCLVICSKETETSVHSPQESSSINGGKDEIRCNRNHHWLHKKTIADVV EALVGAFIVDSGFKAASAFLKWIGIQVDFEASQVSNICSASTIFKPLSAQIDITALENLL GYQFLHKGLLIQAFVHPSYNNHLGGCYQRLEFLGDALLDYLITSYLYSVYPKLKPGQLTD LRSFSVNNNSFADIAVHRSFHKFIICDSSSLCASMNKYVDFIRTTASENGIVERPSCPKA LGDLVESCVGAILLDTGFDLNRVWKIMLSFMDPVMSFSKLQLNPIRELQELCQFQNWDLE FPTLKKDGLFLVEVKVEGKKVCAAACATNLNRKAARRMAAQQVCEKLKAEGYKPKYKSLE EVLKSSRKMEAKLIGYDEAPIDVTAPDAIPFGNLKLQESSRSQYNVKVDHLDEEPKKIFP VSIRPIRPPQPRLEAQKPQSTATIENNSCNSDPLATGGSSKKSARSWLYEICAANCWKPP SFECCNETGPHHLKEFTFKVSVKIEEASDVLTAFGAPHSRKKDAAEHAAKGAIWYLKNAG YVHE NT seq 4875 nt NT seq  +upstreamnt  +downstreamnt atggagggcggcgacggtggagcctctatagcattgtcgatttccgagcagttttcgact ctctcggtgggttctggtgaagaatcgagtggggatgatcagaacacggagaaagaccca agaaaaatagccagaaggtatcaaatcgatctttgccagaaagctttggaggagaacatt attgtgtatctggaaacaggatgcggaaagactcacattgctgtgctgcttatgtacgag atgcgtcacttgataaagaaaccccagaagaacatttgtgtgtttcttgctccaacagtg gcactggttcaacagcaagcaaaggttatacaagactccactggttttaaagttgggatg tattgtggaagttctaagcgtttgaagtaccatcatgattgggaaaaggaactggaaaac tacgaggtttttgttatgacccctcagatactattgcgtaatttaagtcactgcttcatc aggattgaatcaattgctcttctgatatttgatgagtgccattatgcacaacttgacagc aatcatccttatgcagaaatcatgaaagtcttctacaaaaatgacgtcacaaaagttccc cgtatatttggcatgactgcatctccaaagttagggaaaggtgcttccatcaatactctt gaaaccttacttcgtgctaaggtttattctgttgaggacaaggaggagttggaacaattt gtgtcatctcctattgttaatatatattattatggtccttctgtaatcggctcatcttgc cctcatatgatttattacagcaaacttgaggagataaaacgccagtgtgtgtcaacactg agtgggaagactgatgatcatggcagtcttaagagcatcaagaagatgctccagagagag cacaataatttgatattttctcttgaaaatcttggcctttggggagcatttcaggcttgt cgcatccatttgaagagtggtcactctgaacgaaacgaaatgatagaggcaggaaatgct ggtgatgactctttatgtaacagatattttactcaggctgcttcgctctttgcttgtgat tgcgtgaaagatggcaatgaagctgatttatctggtgtggaggttttaaaggagccgctt ctctcaaaaaagcttttacgacttgttggaattctttcgaattttaggttacaaccaaat atgaaatgtatagtttttgtgaataggattgtaattgcgagagccttgtcatacatactt cagaacctcaagttcctatcatcttggaagtgtgatttccttgtaggagtccactctgga ctgaagagtatgtctcgaaaaattatgaacaccattcttgaaaagttccggtctggcgag ctgaatttattagttgcgactaaggtgggtgaggaaggacttgatattcaaacatgttgc cttgtcatacggtttgatcttccagaaactgttgctagttttatacagtctagaggtcgt gcacgcatgccacaatctgaatatgcatttttggtggacagaggcaatgagagggagcgt aacttaattttgaactttaaaaaggacgaagacaaaatgaacgaagaaatagcgtccaga aaatctagtgtgacaattgttgaatttgaggaaagaacctataaagtaacttcaactggt gccaccatcagttctggatctagtgtctcattactccaccattactgttctaaacttcca catgatgaatatttcaaccccaagccggagttcttctactttgatgatgtagaaggaact gtgtgccacataattctaccttccaatgctccaattcatcaaattgtcagttcaccacaa tcgtcaacagaagcagctaagaaagatgcctgtttgaaagtgtgcaaagaattgcatgaa ttgggtgccttgactgactatctcttgccggatcatgatgatggaaatgaggaattggag caagaattttccgattcagacagctgtgatgatgaaccttcaagaagagaactacatgag atgcttgttcctgaagcacttaaagaaccatggacagatctggagaatcctgtttgtctt aactcttattttataaagttcagtcctcagccagcagataggagttataaaaactttggt atttttgtgaaaacacccctcccaggagaggctgatagaatgaaacttgatctctgtttg gctcgtggcagatcagtgatgacagagcttatcccatcaggagtatcaaaatttgataaa gatgggattctgcaggtacaaaaatttcaagaaatgttcctcaaggtcatccttgaccga tcagagttcattcctgaatttgtttctttagggaaaaatggttttagtaatttgggctca tctactttctacctgttgcttcctgtcattctctatgggaacaaaatgactgtagactgg aagcttatcagaagatgtttatcatcgccaatcttcaggaatccggaggatgctagagac agtgtcctccctcatttgaacgatcacttggaacttgctaatgggccccatcacatagat gatgtcataaatagtttggtatatgctccatgtaaggatatatttttctttatttctgat gttgttcgagcgaggaatggatacagcgaatttaaaggttcaatgagtcatatagagcac tacaataaaacgaatggcattcatctttcataccctgaccaacctcttttaaaagcaaaa cagcttttttgtttggacaatttactaaggaaaggagggaattcagaatcacgtgaaaaa gaggagcactttgttgaattacctcctgagatttgtcaactgaaggtagttggcttttct aaagaaattggaagttctctgtctttgctaccatcaattattcatcgtttagaaagcttg cttgtggcaattgaactgagggacagattgtctgcttcattccctgagggtactgaagtc actgcttatcgtgtactcgaagcactgacaacagagaaatgcaatgaacgattttcactt gaaaggcttgaagtgctcggtgatgctttccttaaatttgcagtaggcaggcacctcttt ctattgtatgatgcccttgatgaaggacagctaacaagaaagcgttctaacatcgtcaat aattccaatttattcaggctagcaacagtgagcaaattacaggcatacattcgtgatcaa tcatttgatcctggccaattttttgccctgggccgcccttgtttagtaatatgtagtaag gaaacagagacttctgtacattctcctcaagaaagtagttcaataaatggtggaaaagat gaaattagatgcaatagaaaccatcattggttgcataagaaaactattgccgatgtggtt gaagctctagttggagcattcatagttgacagtggcttcaaggcagctagtgcatttctc aaatggattggcatacaagtggactttgaggcttcacaagttagtaacatatgctcggca agcacaatcttcaagccactttctgctcaaatcgacattacggccctcgaaaatttgtta ggatatcaattcctccataaaggtttgctcatacaagcttttgttcatccttcgtacaac aatcatctgggaggttgctatcagagactggagtttctcggagacgctttactggattat ttaatcacatcatatctgtattcggtttatccaaaactcaagcctggtcagttaacagat ttgagatctttctcagtaaacaataactccttcgctgacattgccgtgcatcgctccttc cataaatttataatctgtgattcaagtagcctttgtgcgtctatgaacaaatacgtcgac ttcattagaacaactgcttcagagaatggtattgttgaaaggccaagttgtccaaaggct ttaggtgatctggtagagtcttgtgttggcgccattcttcttgacacaggctttgacttg aaccgtgtttggaagataatgctctcttttatggatccagtcatgagcttttccaagttg cagcttaatcctataagggagcttcaggaactttgccagtttcaaaattgggacttggag ttcccaacattgaaaaaggatggattatttttagttgaagtgaaagtggaaggtaaaaaa gtttgtgcagctgcttgtgctaccaacctcaatagaaaagctgctagaagaatggctgca cagcaagtgtgtgaaaaattgaaggctgaaggttacaaacccaagtataaatcattggaa gaagttctgaagtcaagccgcaagatggaagccaagttaattggatacgatgaagcacca attgatgttactgctccggatgctattccattcggtaacttgaagttgcaagaatcttcc agaagtcagtataacgttaaagtggaccaccttgatgaagagcctaaaaagattttccca gtcagtatcagacctataagaccaccccaacctcggcttgaggcacagaaaccacaatcg actgcaaccatcgaaaacaatagctgcaattcagacccactggcaacaggtggctcatct aagaaatcagcaaggtcatggttgtatgaaatttgtgcggctaactgttggaaacctcca tcttttgaatgttgcaacgagacaggaccacatcacttgaaagaattcactttcaaggtg tctgtgaaaattgaagaagcctcggatgtgcttacagcttttggagcacctcattccaga aagaaagacgcagcagagcatgcagccaaaggggcaatttggtacctaaagaatgccgga tatgtgcatgagtaa

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