Camellia sinensis (tea plant): 114308424
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Entry
114308424 CDS
T07364
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114308424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114308424
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114308424
mRNA degradation factors
5'-3' decay
Decapping complex
114308424
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_IFT122_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
Prominin
Motif
Other DBs
NCBI-GeneID:
114308424
NCBI-ProteinID:
XP_028109810
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MASPGNQNQPGGPFDMHKFFKPSPNPISPNPNANLSSSPFSPSSAYPPPPSSSYPPPTGP
YQFHQPQFHIPSYPQQDHQRSISYPTPPLQSPPPHHLPPQNPNAGARLMALLSAPPSTLE
LPQLPTVPPIAPIQPSSSGSSDFSMPMPSNVPILPAVPLAPNVNPGVIAHSAPMRMASSK
LPKGRHLIGDRAVYDIDVRMEGEVQPQLEVTPITKYVSDPGLVLGRQIAVNKTYICYGLK
MGAIRVLNINTALRSLLKGLAQQRVTDMAFFAEDVHLLASASIVGRVYVWKITEGPDEED
KPQITGKIVIAIQIVGEGDSVHPRVCWHCHKQEVLVVGIGKRVLRIDTTKVGKGEVFSAE
EPLKCPVDNLIDGIQFVGKHDGEVTDLSMCQWMTTRLVSASTDGTIKIWEDRKLQPLVVL
RPHDGQPVNSVTFLTAPHRPDHIILITGGPLNREVKIWASASEEGWLLPSDSESWQCTQT
LDLKSSSESRVEEVFFNQVVALSQAGLLLLANAKKNAIYAVHLEYGYNPAATRMDYIAEF
TVTMPILSFTGTSDLLPHGEHIVQVYCVQTQAIQQYALDLSQCLPPPLENVVLEKSDSSV
LRDATSMEGVTTSETSGSKPTEISLASSVPKLSVNDSGSESAPITITRNPMGSTSMDTAT
SAEFATFEPRPISLPTVSSNNDVSCIASPPLPLSPKLSGKLSGFRSPTNGFEPGPVLDDR
GGDQQAIEYSVDRQMDTVHTNLSDVPSLDDDSKNGENKGVRDDITSVLNQHIKFKHPTHL
VTPSEILMATSSSESPHVIEQKSEGEPNIQDVVVNSDVRNVEVDVKVVGETGSSQNNEIG
SQVESPNLVPENKERVFCSQASDLGIEMARECSVLSSEMYIVEESQQLDGANVSEALAQP
SNVEEEVHDSTKDASGKNVGSAMPAAVPQQMTPTTKGKKQKGKNAQGSGPSSPIPSAFNS
TDSSEPGVSSSIPSVEAVSAKIMAMQEMLNQLTTMQKEMQKQMTVMVAVPVTKEGRRLEA
SLGRSMEKAVKANSDALWARFQEESAKQDKLARERTQQITSLITNCINKDLPAMVEKSVK
KELAAVGPAIARTISPAIEKSVSAAIVDSFQRGVGDKAVNQLEKSVNSKLETTVARQIQA
QFQTSGKQALQDALKSSLDGSVIPAFETSCKAMFEQVDATFQKGMFEHTTAAQQQFESIH
SPLALALRDAINSASTVTQTLSGELADGQRKLLALAVAGANSKAVNPLVTQLSNGPLGGL
HDKFEAPLDPTKELSRLISEHKYEEAFTTALQRSDVSIVSWLCSQVDLQGILSMVPLPLS
QGVLLSLLQQVACDISKDTTRKLGWMTDVAVVINPADPMIAVHVRPIFEQVYQILSHHRS
LPTTSSAEISSIRLVMHVINSMLMTCK
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctggaaatcaaaaccaaccaggagggccatttgatatgcacaagttcttc
aaaccctcaccaaaccctatatccccaaatcctaatgccaatttgagttcttcaccattc
tcaccttcctctgcttatcctccacccccttcttcttcttaccctccgcccactggccct
taccagttccaccaacctcagtttcacatcccttcttaccctcaacaagatcaccaaaga
tctatctcttatcctacaccccctcttcagtctccccctccccatcatctccctcctcaa
aaccctaatgccggagcgcggctcatggctttattgagtgctccaccgtcgactctcgag
cttccacagctacccactgtgcctccaatagctccaattcagccctcctcatctgggtct
tcggatttttcaatgcccatgccctctaatgttcctatactgcctgcggtccctttggcg
ccgaatgtcaatccgggtgtgattgcacattcagctcccatgaggatggccagtagtaaa
ctcccaaagggtcgccatttgatcggtgaccgcgcggtttatgatattgatgttagaatg
gaaggtgaagtgcagccacaacttgaggttactccgataaccaagtatgtttctgatcct
ggtcttgttttgggccgccaaattgcggtcaataagacatacatatgctatggattgaag
atgggagctattcgggtcctcaacataaacaccgcattgagatcattgcttaaaggtctt
gcgcagcagagggtcacagacatggctttttttgccgaggatgttcaccttttggctagt
gcgagcattgttgggagggtttatgtatggaagattactgaaggtcctgatgaagaagat
aagccacagattacaggaaagattgttattgctattcagatagtaggagaaggagactct
gttcatccacgagtttgttggcactgtcacaagcaagaagttctggtagttgggattgga
aaacgagttctgagaatcgatactacaaaagttggaaaaggtgaagtattttcagcggag
gagcctctcaaatgtcctgttgataatctgattgatgggatccagtttgttggtaaacac
gatggagaagtgactgatttgtcaatgtgccaatggatgactacccgtttggtttctgct
tcaacagatggcacgataaaaatttgggaggatcgcaaattacaaccacttgtggtattg
aggccacatgatggtcaacctgttaattctgttacattcttgactgcccctcaccgccca
gatcacattattcttataacagggggtccactgaatcgggaagtgaagatatgggcctcg
gccagtgaagagggctggctgctccctagtgattctgaatcatggcaatgtacccagaca
ttggacttgaagagctcatctgaatctcgagttgaagaggtgttctttaatcaagttgtg
gccttgtctcaagcagggcttctcttattagcaaatgccaagaagaatgctatatatgct
gtacacttagaatatggttataatccggcagcaacccgaatggattatattgctgagttt
actgtcaccatgccaattttgagttttactggaaccagtgatttattacctcatggtgaa
cacattgttcaggtttattgtgtccagacacaagctattcagcagtatgctttggacttg
tcccagtgtttgccacccccactagagaatgtggtgttagagaagtcagactcgagtgtt
ttgcgtgatgcaactagtatggaaggagttactacttctgagacttctggaagtaaacct
actgagatttctttagctagttcagtacccaaactctctgtaaatgacagtggctctgag
agtgctcctattactattaccaggaatccaatgggctctacttcaatggacactgccact
tcagcagaatttgctacttttgaacctagacctatttctttgccaactgtaagtagcaat
aatgatgtatcttgcattgcatcacctcctttacctttgagtccgaagttgtctggaaaa
ctttctggttttagaagtccaacaaatggctttgagccaggtcctgtgctggacgatcgt
ggtggagatcaacaagctattgaatattcagttgataggcaaatggatactgttcatacg
aacttgtctgatgtcccttctttggatgatgattcaaaaaatggtgaaaacaagggtgta
cgggatgatattacctctgttctcaatcagcatattaagttcaagcacccaactcatctg
gtaactccgtcagagattttgatggctacttcatcatctgaatctccccatgttattgaa
cagaagagtgagggagagccaaacattcaagatgtggttgtcaacagtgatgtgcgcaat
gttgaggtggatgttaaggttgtgggtgaaaccggatcgagtcagaataatgaaattggc
tctcaggtagaatctcccaatcttgttccggaaaataaagagagagtgttttgttctcag
gcttcagatcttggtattgagatggccagagaatgttctgtgttatcgtctgaaatgtat
attgtagaggaatctcagcaacttgatggagctaatgtaagcgaggcactggctcaacct
tcaaatgttgaggaagaagtccacgactccacaaaggatgcctctggaaaaaatgtggga
tcagccatgcctgctgcagttccccaacagatgacaccaactacgaaagggaaaaagcag
aagggtaagaacgctcaaggatcaggtccatcatcgccaatcccaagtgctttcaattcc
acagattctagtgagccaggtgttagttcaagtattccttctgtggaagctgtgtctgca
aaaattatggccatgcaggaaatgcttaatcagttaacaaccatgcaaaaagaaatgcag
aagcagatgacagtgatggttgctgtcccagttactaaagaaggtagacggctggaggca
tcccttgggcggagcatggagaaagctgtcaaggccaattctgatgcattatgggctcgt
ttccaagaagagagtgcaaaacaggataaattagcacgagagcgtactcagcaaataaca
agtttgatcactaactgtataaataaggacttgccggctatggtggagaaatcagtgaag
aaggaattagctgcagttggaccagccatagctcgtacaatttctccagctattgaaaaa
tctgtatctgcagctattgtcgattccttccagagaggagttggtgacaaggcagtgaac
caactggagaaatcagttaattcaaagcttgaaactactgttgccaggcagatccaagct
caatttcaaacttctggaaagcaagcacttcaggatgcattgaagtctagtttggatggt
tcagttatccctgccttcgagacgtcatgcaaagccatgtttgagcaagttgatgctacc
tttcagaaaggaatgtttgaacatacaacggcagctcagcaacagttcgagtccattcat
tccccgctggcacttgctttaagggatgccattaattcagcatcgactgtgactcaaact
ttaagcggggaattggctgatggtcaaagaaagttgttagctcttgccgttgcaggagca
aattcaaaggcagtaaatcccttagttacccaacttagcaatggacctttgggtggtctc
catgacaagtttgaggcacctttggatccaaccaaagagctatctagattgatatctgaa
cataaatatgaggaagctttcaccacagccctacaaagaagtgatgtttctatcgtgtct
tggttatgctctcaggttgatttacagggaattttatcaatggttcctctccctttgagc
caaggagtgctgctatcacttctgcagcaggtggcatgtgacatcagcaaggacacgacc
cgaaagctggggtggatgactgacgtggcggttgtgataaacccagctgacccgatgatc
gcagtgcacgtgcgacccatctttgagcaagtgtatcagattctaagccatcatcgcagc
cttcccactacttccagtgcagagatctcaagtattcgacttgttatgcacgttatcaac
tcgatgctgatgacctgtaaatga
DBGET
integrated database retrieval system
