KEGG   Camellia sinensis (tea plant): 114308823
Entry
114308823         CDS       T07364                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03082  ATP-dependent chromatin remodeling
csin03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    114308823
   03083 Polycomb repressive complex
    114308823
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csin03036]
    114308823
Enzymes [BR:csin01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     114308823
Chromosome and associated proteins [BR:csin03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     114308823
   HDAC complexes
    Sin3A-HDAC complex
     114308823
    BRAF-HDAC complex
     114308823
    REST complex
     114308823
    SHIP complex
     114308823
    MiDAC complex
     114308823
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     114308823
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    114308823
  Chromatin remodeling factors
   NuRD complex
    114308823
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 114308823
NCBI-ProteinID: XP_028110292
LinkDB
Position
Unknown
AA seq 430 aa
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGQREGKFYAINVPLKDGIDDTSFTRLFKA
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY
TKENVARCWTFETGVLLDSELPNEIPENEYVKYFAPDFSLRIPNGHIENLNSKSYLSMIK
TQVLENLRCIQHAPSVQLQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDHNMDDV
NT seq 1293 nt   +upstreamnt  +downstreamnt
atgcgatccaaggacagaatcgcctacttctatgacggggacgttggaagtgtgtacttt
gggccgaaccatccgatgaagccgcatcggctttgtatgactcaccatcttgtcctctcc
tatgacctccacaagaagatggaaatttataggcctcataaagcatatccagtcgagctt
gcgcagtttcattcagctgattatgttgagttcttgcaccggattacccctgacactcaa
cacttgttctcgaatgaattggcaagatataatcttggagaagattgccctgtctttgaa
aacctgttcgagttctgtcaaatttacgctggtggaactatagatgctgcacgcagattg
aacaatcggctttgtgacattgccataaattgggctggtggactacatcatgccaagaag
tgcgaggcatctggtttttgttacatcaatgacttggttttggggattttggagcttcta
aaatatcatccacgcgttctatacattgatatagatgtgcatcatggtgatggtgttgaa
gaagcgttctattttacagacagggtgatgactgttagttttcacaagtatggagattta
ttctttcctggaacaggtgatgttaaggaaataggacaaagagaaggaaaattttatgcc
ataaatgtcccactcaaggatgggatagatgacaccagctttactcggctttttaaagca
atcattgccaaggttgtggaaacatatttgccaggagtgatagttctccagtgtggggca
gattcacttgccggggaccgcttggggtgctttaacctctccattgatggacatgctgaa
tgtgtgaagtttgtcaagaaattcaatttgcccttactggtaacgggaggtgggggatac
acgaaggagaatgttgctagatgctggacttttgaaaccggagttcttctggattcagaa
ctccccaatgagatcccagagaatgagtatgtcaaatattttgccccagatttttcgttg
aggattcctaatgggcacatagagaacttaaatagcaagtcatatcttagtatgattaaa
acgcaggtgttggagaatcttcgttgcattcaacatgctccgagtgtgcaattgcaagag
gttccaccggacttctatattcctgattttgatgaagatgagcagaatccagatgaacgt
gtcgatcaacacacacaagacaagcaaatccagagagatgatgaatattatgaaggcgac
aatgacaacgatcataatatggatgatgtgtaa

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