Entry |
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Name |
(RefSeq) histone deacetylase 9
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KO |
|
Organism |
csin Camellia sinensis (tea plant)
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:csin00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
114308823
03083 Polycomb repressive complex
114308823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:csin03036]
114308823
Enzymes [BR:csin01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
114308823
Chromosome and associated proteins [BR:csin03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
114308823
HDAC complexes
Sin3A-HDAC complex
114308823
BRAF-HDAC complex
114308823
REST complex
114308823
SHIP complex
114308823
MiDAC complex
114308823
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
114308823
Heterochromatin formation proteins
Other heterochromatin formation proteins
114308823
Chromatin remodeling factors
NuRD complex
114308823
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
430 aa
MRSKDRIAYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFSNELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHPRVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKEIGQREGKFYAINVPLKDGIDDTSFTRLFKA
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY
TKENVARCWTFETGVLLDSELPNEIPENEYVKYFAPDFSLRIPNGHIENLNSKSYLSMIK
TQVLENLRCIQHAPSVQLQEVPPDFYIPDFDEDEQNPDERVDQHTQDKQIQRDDEYYEGD
NDNDHNMDDV |
NT seq |
1293 nt +upstreamnt +downstreamnt
atgcgatccaaggacagaatcgcctacttctatgacggggacgttggaagtgtgtacttt
gggccgaaccatccgatgaagccgcatcggctttgtatgactcaccatcttgtcctctcc
tatgacctccacaagaagatggaaatttataggcctcataaagcatatccagtcgagctt
gcgcagtttcattcagctgattatgttgagttcttgcaccggattacccctgacactcaa
cacttgttctcgaatgaattggcaagatataatcttggagaagattgccctgtctttgaa
aacctgttcgagttctgtcaaatttacgctggtggaactatagatgctgcacgcagattg
aacaatcggctttgtgacattgccataaattgggctggtggactacatcatgccaagaag
tgcgaggcatctggtttttgttacatcaatgacttggttttggggattttggagcttcta
aaatatcatccacgcgttctatacattgatatagatgtgcatcatggtgatggtgttgaa
gaagcgttctattttacagacagggtgatgactgttagttttcacaagtatggagattta
ttctttcctggaacaggtgatgttaaggaaataggacaaagagaaggaaaattttatgcc
ataaatgtcccactcaaggatgggatagatgacaccagctttactcggctttttaaagca
atcattgccaaggttgtggaaacatatttgccaggagtgatagttctccagtgtggggca
gattcacttgccggggaccgcttggggtgctttaacctctccattgatggacatgctgaa
tgtgtgaagtttgtcaagaaattcaatttgcccttactggtaacgggaggtgggggatac
acgaaggagaatgttgctagatgctggacttttgaaaccggagttcttctggattcagaa
ctccccaatgagatcccagagaatgagtatgtcaaatattttgccccagatttttcgttg
aggattcctaatgggcacatagagaacttaaatagcaagtcatatcttagtatgattaaa
acgcaggtgttggagaatcttcgttgcattcaacatgctccgagtgtgcaattgcaagag
gttccaccggacttctatattcctgattttgatgaagatgagcagaatccagatgaacgt
gtcgatcaacacacacaagacaagcaaatccagagagatgatgaatattatgaaggcgac
aatgacaacgatcataatatggatgatgtgtaa |