Camellia sinensis (tea plant): 114310336
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Entry
114310336 CDS
T07364
Name
(RefSeq) small RNA degrading nuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114310336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114310336
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
Pre-60S particles
RNases
114310336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Ferritin
G6PD_N
Motif
Other DBs
NCBI-GeneID:
114310336
NCBI-ProteinID:
XP_028112090
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MPSPNHKFETEASEEEDKSTKNTTFFDIYGPQGKVDVVFKAPEAGSTLNLQDVQGLVMWV
LAEGFMPSWVFIKNKPLIPKVVMLYVPGLDAGLYLSQSKILKGFKDCCGIPRPVLALSCV
SDGMHTIDALLTCKFKRKRDGADSVLRKSAQTSEQGGFSSGSENPSFSDLMKDIPFPITY
YTLTTKQLEDNGYFHDQPGFLSTLPSPPGNPVHDILALDCEMCITSEGFELTRVTLVDIK
GQVVLDKLVKPSNAIIDYNTRYSGITSEMLSGVTTTLEDIQEDFLQLVYKETILVGHSLE
NDLLALKISHNLVIDTAVLYKHPRGGSYKTALRVLTRRFLYREIQESGSGHDSIEDARAA
MELALLKIRHGPDFASPPSLARKKLLTVLSESGKASTLIDNISIVKRYASESSHAIPVSS
DDKALLKASKEVTNKKVHFVWAHFSELNSYFKKQAEDTEKVNGRLAEMISLLTCKKKSTS
RNGIKYKVSSELKDILSRLDARIQCLHSNLPTNAIIVICTGHGDTAIVHRLRKMLTQQID
TALCREKLVKVLEELQAQAEVGLCFVGVKH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgccttctccgaaccacaaattcgaaaccgaagcttctgaggaggaagataaatccaca
aagaatactactttctttgacatctacggtccacaagggaaagtagatgttgtttttaag
gcacccgaagctggttcaactttgaatttgcaagacgttcaaggacttgttatgtgggtg
ctagctgaaggattcatgccatcatgggtttttatcaagaacaagcccctgattccaaaa
gtggttatgctttatgtccctggccttgatgcaggcttgtacttatcacagtctaaaata
cttaaaggttttaaagactgttgtggtattccaaggccagtattggctcttagctgtgta
tcagatggaatgcacactatagatgcactccttacatgcaagttcaaaagaaaaagggat
ggagctgattcagttttgaggaaatctgcccaaacatccgaacaaggaggttttagttct
ggttccgagaatccatcatttagtgaccttatgaaagatataccattccctattacgtac
tacacacttacaacaaagcaattagaagataatggatacttccatgatcaaccaggtttt
ctttcaactcttccttctcctccaggaaatcctgtccatgacattttggctcttgactgt
gagatgtgcatcaccagtgaggggttcgagctcacaagagtaacactggttgatattaaa
ggacaggtagttctagataaactggttaaaccatcaaatgctatcattgattacaacact
aggtatagtggaatcacaagtgaaatgttgagtggggtgaccacgactcttgaagatatt
caggaagattttctacaactagtctataaagagactattctagttgggcattcgttggag
aatgatttgttggcattgaagatatctcacaatctggtgattgatacagcagtgttgtac
aagcacccccgtggtggatcctacaaaactgcacttcgtgtgctcaccagaagattcctt
tacagggagatacaggagtcgggaagtgggcatgatagtatagaagatgcaagagctgct
atggaactggcattgttaaagatcaggcatggaccagattttgcttcacctccatcatta
gcgcggaagaagctccttacggttttaagtgagtctggcaaggcctcaactttgattgat
aatatttccatagtgaagcgatatgcttctgagtcatcccatgccattccagtatcttca
gatgacaaggcccttttgaaggccagtaaagaggttacaaacaaaaaggtacactttgtc
tgggcccacttttcggaattaaattcctatttcaagaaacaagcagaggacacagagaag
gtaaatggaaggcttgctgaaatgatatcactgcttacgtgcaaaaagaaatctactagc
agaaatggcatcaaatacaaggtctcctctgaactaaaggacattttaagtcgcttggat
gctagaatccaatgtctccactccaatttaccaacaaatgccataattgttatttgcact
ggtcatggggacacggcaatcgttcacagattgaggaaaatgcttacacagcagattgat
actgctttgtgccgtgagaaacttgtaaaggtcttggaagagctgcaggcccaagctgaa
gtaggtttgtgttttgtgggtgtaaaacattga
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