Camellia sinensis (tea plant): 114310486
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Entry
114310486 CDS
T07364
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csin03400
]
114310486
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114310486
DNA repair and recombination proteins [BR:
csin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
114310486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
DExH14_plug
ResIII
Helicase_C
AAA_22
AAA_30
DEXQc_Suv3
AAA_19
Helicase_PWI
TBSV_P22
Motif
Other DBs
NCBI-GeneID:
114310486
NCBI-ProteinID:
XP_028112281
LinkDB
All DBs
Position
Unknown
AA seq
2087 aa
AA seq
DB search
MLLQLPRLSNSLRDPFDIDHAYLQRKSILRNQKPRSYGNSLEQSDLAKKIVYRWDEASFE
VRQAYKEFVGAVLELIGGEVLSEEFHEVALMVYRLCAKPVEEDEDDRRIAEKKLELQKVL
GHAVSDASLQKVSSLAQSLSLLQSNDCSDVFVPQRETNRSCDDLEFGADLVFQCPARFVV
DVSLEEGELLGEGTASSFSLLQEGLHDCSDPKGYDSAADGKHFNLQWLRDACDKIVKGST
SQLPQDELAMAVCGLLDSEKHGDEIAADLLDLVGDSAFEIVQDLISHRKQIVDAIHHGLL
VLKSDKTATNTQLRMPSYGTQVTVQTESERQIDKLRRKEEKRNRRGTNYGVEDNLSGLSF
SSLLQASEKKSPFDDLIGSGEGSHPLAATALPQGTVRKHYKGYEEVIIPPTPTAPMKPGE
NLIEIKELDEFAQTAFHGYKSLNRIQSRIFQTTYYSNENILVCAPTGAGKTNIAMIAVLH
EIGQHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNITVKELTGDMQLSKSEL
EVTQMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVE
STQTMIRIVGLSATLPNYLEVAQFLRVNPDKGLFFFDSSYRPVPLAQQYIGISEHNFQAR
NNLLNEICYNKVVDSLKQGHQAMVFVHSRKDTGKTADKLVELAQKNGELEVFMNDTHPQF
ELIKRDVLKSRNKQLVQLFEHGIGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGV
NLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHEKLAYY
LRLLTCQLPIESQFISSLRDNLNAEVVLGTVTNVKEACAWLGYTYLFIRMKMNPLAYGIG
WDEVIGDPSLTLKQRALVSEAARALDKAKMMRFDEKSGNFYCTELGRIASHFYIHYSSVE
TYNEMLRRHMNDSEVIDMVAHSSEFENIVVREEEQNELEQMVRTSCPLEVKGGAANKHGK
VSILIQLYISRGSIDSFSLVSDAAYISASLARIMRALFEICLRRGWCEMTSFMLDYCKAV
DRQIWPHQHPLRQFDRDMSSEVLRKLEERGADLDRLYEMEEKDIGALIRYAPGGRLVKQC
LGYFPSIQLSATVSPITRTVLKVDLLLTPDFIWKDRFHGTVQRWLILVEDSENDHIYHSE
LFTLTKRMAKAEPQKISFTVPIFEPHPPQYYIRAVSDTWLQAEALYTISFQNLALPEGRT
SHTELLDLKPLPVTALGNRAYEALYKFSHFNPIQTQTFHVLYHTGENVLLGAPTGSGKTI
SAELAMLHLFNTQPDMKVIYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDYTPDLMA
LLSADIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYIS
SQTERAVRFVGLSTALANAHDLADWLGVGEIGLFNFKPSVRPVPLEVHIQGYPGKFYCPR
MNSMNKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDELSRQFLSMPEEALQ
MILSQVTDQNLRHTLQFGIGLHHAGLNDKDRSLVEELFANNKIQVLVCTSTLAWGVNLPA
HLVIIKGTEYYDAKARRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFL
YEPFPVESSLREQLHDHINAEIISGTICHKEDAVHYLTWTYLFRRLAVNPAYYGLEDTEP
GTVSSYLSSLVQNTFEDLEDSGCVKMDEDSVEPTMLGSIASQYYLSYMTVSMFGSNIGQD
TSLEVFLHVLSGASEYDELPVRHNEENFNEALSEKVPYMVDTNRLDDPHVKANLLFQAHF
SQLELPISDYITDLKSVLDQSIRIIQAMIDICANSGWLSSTITCMHLLQMVMQGLWFDKD
SSLWMLPSMTDDLVGILRRKGISNVQQLLDLPKSTLPACIGNSTASRFYQDLEQFPRVQV
RLKLQKRNPDAGKAFNLNITLEKTNSWRKQSRAFTPRFPKLKDEAWWLVLGNTSTSELYA
LKRVSFSNRLVTHMELPSTPSTIQGVKLILVSDCYIGFEREYSVGLV
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttcagcttcctcgtttatcgaactctctgagagacccattcgacatcgatcac
gcttatctccaacgcaaatccatcctccgaaaccaaaaacctcgcagttatgggaactcg
ctcgaacagtcagacctcgcgaagaagatcgtttacagatgggatgaagcatcgtttgaa
gtgcgacaagcatacaaagagtttgtgggtgcggttttggagctgattggcggcgaagtg
ctgtcggaggagtttcatgaggtggcattaatggtttatcggctttgtgccaagccggtg
gaggaggacgaggatgacagaaggattgccgagaagaagttagaattgcaaaaagtactt
ggtcatgctgtttcagatgcaagtctacagaaagttagctctctagcccagagcctttcc
ttgttgcagtctaatgattgttcagatgtgtttgttccacaaagggaaacaaacaggagc
tgtgatgatttagaatttggtgctgaccttgtttttcaatgccctgctcggtttgtcgtt
gatgtctctttagaggaaggggaattgttgggggagggaactgcttcatctttttctttg
cttcaagaaggattgcatgactgcagtgaccctaaaggttatgattctgctgctgatggt
aaacacttcaatttgcagtggttaagagatgcgtgtgataaaatagtgaaaggaagtact
tcacaacttcctcaagatgaactagcaatggccgtctgtggattacttgattctgagaaa
catggtgatgagatagctgccgatttgttggatcttgttggggatagcgcatttgaaata
gttcaagacctaatttcgcacaggaagcaaattgttgatgctatccatcatgggttactg
gtactgaaatctgacaaaacggctacaaacactcaattgcgcatgcctagttatggaacc
caggttactgttcaaacagagtctgaacggcaaattgataaacttcgacgcaaggaggaa
aagaggaatagacggggaacaaattatggggttgaagacaacttgtctggcttgagtttt
agttctttactccaagcaagtgaaaagaaaagcccatttgatgatttgattgggtctggt
gaagggtcacacccattagcagcgactgcccttccccaaggcactgtcaggaaacactac
aagggatatgaagaagttattattcccccaacaccgactgcaccaatgaaacctggggaa
aatttgattgagataaaagagttagatgagtttgctcaaactgctttccatggctacaaa
tctctgaaccgtatccagagcagaatatttcaaactacttattacagcaatgagaacata
ctagtttgtgctccaacaggagctggtaaaacaaatatagccatgattgctgttctacat
gagattggacagcacttcaaagacgggtacttgcataaagatgaatttaagatagtttat
gttgctcccatgaaggcattagctgcagaggttacctccacttttagccatcgtttatct
cctttaaatataacagtgaaagagcttactggagacatgcaactttctaagagtgaactt
gaagtcactcagatgattgtgacaacgcctgagaaatgggatgtcattactcgtaaaagt
agtgacatgtcgctttcaatgctcgtgaaactcctaattattgatgaagtacatcttttg
aacgatgatagaggccctgtaatagaagcattagttgctcgtacccttcgtcaggtagaa
tccacacagaccatgatacgtattgtgggcctctctgctactctgcctaactatttagag
gttgctcagtttctaagggtgaatccagataagggtcttttcttctttgattccagctac
cgtccagtgcctcttgcacaacagtatattggaattagtgagcacaactttcaggctcgc
aacaatctgttgaatgaaatatgctacaataaggtggttgattcattaaaacaagggcat
caggcaatggttttcgtacattcacggaaagacacagggaaaacagctgacaaattggtc
gaacttgcccagaagaatggtgaattggaggtctttatgaatgatacacatccacagttt
gaattgatcaagagggatgttttgaagtccagaaacaagcagcttgttcaactctttgaa
catggaattggaatccatcatgctgggatgctacgtgccgatagaggtttgactgaacgc
cttttttccgatggactcttgaaggtacttgtttgcacagcaactttggcatggggagta
aatctacctgctcacactgttgtgattaagggaactcaactatatgatcccaaggctggt
gggtggcgagacctggggatgcttgatgttatgcagatctttggacgtgctggaagaccg
cagtttgacaaaagtggtgagggcattataatcacaagtcatgaaaaattagcctactat
ctacgactactgacgtgtcaacttcccattgaaagtcagtttatcagctctttgagagat
aatttaaatgcagaggtggttttgggcaccgtgacaaatgtgaaggaagcttgtgcttgg
cttggatatacatatctttttattaggatgaaaatgaatccattggcatacggtattgga
tgggatgaggtaattggagatccttctttgactttaaaacaaagagctcttgtgtcagaa
gctgcacgtgctcttgacaaagccaaaatgatgcggtttgatgagaaaagtggcaatttt
tactgcactgagcttggtcgaattgctagccacttttatattcactattctagtgttgaa
acttataatgaaatgttgagacggcacatgaatgatagtgaggtaattgacatggtagct
cattcttctgagtttgaaaatattgttgttcgagaggaggaacaaaatgagctagaacag
atggtccgtacatcatgcccgttggaagttaagggtggggctgcaaataaacatggaaaa
gtttcaattctcattcagttgtacatttctcggggctcaatagattctttttcattggtt
tctgatgctgcatacataagtgcaagcttggctcgtatcatgagggccttgtttgagatc
tgtttacgtagaggatggtgtgagatgacttccttcatgttggattattgcaaggctgtg
gatcgtcaaatttggccccatcaacatcccctcagacaatttgacagggatatgtcatca
gaagtactgaggaagcttgaagaacgaggggcggacttagatcgcctctatgagatggag
gaaaaagatattggagctctgattcgttatgcacccggaggaaggttggttaagcaatgt
ttaggatacttcccatctatccagttgtctgctactgtaagtccaatcaccagaactgtt
ttgaaggtggatttgctcttaactccagacttcatatggaaggatcgctttcatgggact
gtgcaacgttggttgattctggttgaggactctgagaatgatcacatttaccactcagag
cttttcacattgacaaagcggatggcaaaagcagaaccacaaaagatttcctttaccgtg
ccaatttttgaaccgcatcctcctcaatattacattcgtgctgtttctgatacttggctg
caagcagaggctttgtacactatatcttttcagaatctagcacttccagagggtcgtaca
tcccacaccgagctgctagacttgaaacccctccccgtaacagcactcggcaacagagct
tatgaagccctgtacaagttttcacacttcaatcccattcaaacacagactttccatgtc
ctgtatcacactggcgagaatgttctcttaggagctccaactggcagtggaaaaactata
tctgctgagcttgctatgcttcacctgttcaacacccagcctgacatgaaggttatttac
atagcacccctgaaggctattgttcgagaaagaatgaatgactggaggaagcgtcttgtt
tcgcaacttggaaagaagatggttgaaatgactggggattataccccagatttgatggct
ctcctgtctgccgatatcattatttctactcctgaaaagtgggatggtatcagtcgtaac
tggcatagcagaagttatgtcacaaaggttggtcttatgattttggatgaaattcactta
cttggagctgatcgtgggcccatacttgaggttattgtctcaagaatgagatacatatct
tcgcagacggagcgtgctgttcgttttgtgggcctttcaacagccttagcaaatgcacat
gatttggctgactggctgggtgttggggaaattggtctattcaatttcaagcctagtgtg
aggcctgtaccgcttgaagttcacattcagggatacccagggaagttttactgtccacgg
atgaatagcatgaataaacccacatatgctgctatttgtacccattcacctaccaaacca
gtcctaatatttgtttcatctcggcgccagacaaggcttactgcactggacctgattcag
tttgcagcctcagatgagttatcaagacaatttcttagtatgccagaagaagcactacag
atgattctttctcaagtcactgatcagaacctgaggcacactttacaatttggcattggg
ttgcaccatgcaggactgaatgacaaggacagatctcttgtagaggaactttttgcgaac
aacaagattcaggtgttggtttgcacgagtacattggcatggggtgtaaaccttccagct
catttggttattattaagggaacagagtattatgatgccaaagctagacggtatgtagat
tttcctatcacagatatcttgcaaatgatgggccgtgcaggccgaccacaatatgatcaa
cacgggaaagctgttattctggttcatgaaccgaagaagagcttctataaaaagttcctg
tatgaaccgtttccggttgaaagtagtctgagggagcagttgcatgatcacatcaatgct
gagataatttctggaacaatttgccataaagaggatgcagtacattatctcacgtggacc
tatttgttccggagattggctgttaatccagcttactatggcttggaggatactgaacct
ggaactgtgagttcttacttatcaagcctggtgcaaaacacatttgaggatctggaagac
agtggatgtgtaaagatggatgaagacagcgtagagcctacgatgttgggttcaatagcc
tctcagtattacctaagctacatgaccgtgtcaatgtttggttcaaacataggccaagat
acatcacttgaagttttccttcacgtactgtctggtgcttctgaatatgatgagcttcct
gtgcggcataatgaggaaaacttcaatgaagcattatctgagaaagttccatatatggtg
gatacgaatcgcctagatgatccacatgttaaagcaaatctactttttcaggcacacttt
tcgcagttagaattaccaatcagcgactatatcacagacttaaaatcagtgttagatcaa
agtatacgtatcatacaggccatgatagacatatgtgctaacagtggatggctttcaagc
acaatcacttgtatgcatcttctgcaaatggtcatgcagggtttatggtttgacaaggat
tcatctctatggatgttgccaagcatgactgatgatcttgtgggcatactaagaagaaaa
ggaatttcaaatgtgcagcaactactggatcttcctaagtcaactttgccggcttgcatt
ggaaattcaactgcttcaagattttatcaggacttggagcaatttcctcgtgtccaagtt
agattaaaacttcagaaaaggaatcccgatgctgggaaggctttcaatctgaacattaca
ttggaaaaaacaaattcctggcgcaaacaatcaagagcttttacccctcgattcccaaag
ttgaaagatgaagcatggtggttggtcctaggtaacacctcaacctctgaactctatgct
ctgaagagagtttctttctccaatcgattggtcacccacatggagttgccgtcaactcca
agcactatccagggggtgaagctgattctagtgtcagattgttacattgggtttgaacga
gaatactctgtaggacttgtttaa
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integrated database retrieval system
