Camellia sinensis (tea plant): 114310665
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Entry
114310665 CDS
T07364
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114310665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csin04121
]
114310665
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114310665
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_At5g56370
LRR_4
Motif
Other DBs
NCBI-GeneID:
114310665
NCBI-ProteinID:
XP_028112531
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
IICVYRNLRELDLQECEVDDLSGHWLSHFPDTCTSLVSLNIACLVSEVSFSALERLVARC
PNLRSLRLNRAVPLERLPNLLRRAPQLIELGTGAYSADLRSDVFSSLTEAFSGCKVLKGL
SGFWDVVPTYIPAVYSICSGITSLNLSYANIQSPDLAKLVSQCHNLQRLWVLDYIEDSGL
GALAASCKDLHELRVFPSDPYVPEPNVSLTEQGLVSVSEGCPKLESVLYFCRRMSNDALI
TIARNRRNLTRFRLCILEPHTADYLTREPLDAGFGAIVEHCKGLRRLSVSGLLTDRVFEY
IGTHAKKLEMLSIAFAGDSDLGLHHVLSGCESLKKLEIRDCPFGDKALLDNAAKLQTMRS
LWMSSCLVTYGACKLLGQKMPRLNVEVIDERGSPDSRPENCPVEKLYIYRSTAGPRLDMP
GFVWTMGANMLH
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
attatttgtgtgtacagaaacctcagagagctggacttgcaggagtgtgaagtggatgat
ctgagtgggcactggcttagccattttcctgatacctgcacatcattggtgtcccttaac
attgcttgcttagtctctgaggtgagtttttctgctctggagcgcctcgtggctaggtgt
cccaacctgaggagtcttcgtctcaaccgtgctgtaccccttgagaggctccctaatcta
ctccgccgagcccctcagctgattgagttggggactggtgcctattcagctgatctccga
tctgatgtcttttcaagcctaacagaagctttttcaggatgcaaggttctcaaggggcta
tctgggttttgggatgtggttccaacctacattccagctgtctattctatctgctctggg
ataactagtctgaatttaagttatgccaatatccaaagccctgatcttgcgaaacttgtt
agccagtgccataatttgcagcgtctatgggtactggattacattgaagacagtggcctt
ggtgcccttgctgcatcttgcaaggatctgcatgaactgagggtgtttccttctgatcca
tatgtcccagaaccaaatgtatccttgacagaacaaggccttgtctctgtttcagagggc
tgccctaagcttgagtcagtcctgtacttctgtcgccgaatgtcaaatgatgcattaatt
accattgctaggaaccgccgtaatctgactcgatttcgtctttgcatccttgagcctcat
actgctgattacctaacccgggagccgttggatgctggttttggagctattgttgagcac
tgtaagggattgcggcgcctatccgtatctggtcttctcactgatcgtgtgtttgagtac
attgggacccatgctaagaagctagagatgctatctattgcctttgcgggtgatagtgat
ttgggcctccatcacgtgctgtctggttgtgaaagcctgaagaaactggagattagagat
tgcccctttggagacaaggctctcttggacaatgctgcgaagctgcagacaatgcgatcc
ctttggatgtcctcttgcctagtaacttatggagcatgtaaactgctaggtcagaagatg
cctaggcttaacgttgaagttatcgatgagaggggatccccagattcaaggccggaaaat
tgccctgtcgagaagctttacatatataggtcaactgcggggccaaggcttgacatgcct
ggttttgtgtggacaatgggtgctaacatgctgcattga
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