KEGG   Camellia sinensis (tea plant): 114310840
Entry
114310840         CDS       T07364                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    114310840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:csin03009]
    114310840
Ribosome biogenesis [BR:csin03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    114310840
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_EML_2 Utp13 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EIPR1 NBCH_WD40 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Nup120_160 Beta-prop_DCAF12 Beta-prop_WDR19_1st WD_LRWD1 PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_Vps41 WD40_like Nucleoporin_N Ge1_WD40 Beta-prop_WDR75_2nd PROPPIN Nbas_N SGL Cytochrom_D1 WDR54
Other DBs
NCBI-GeneID: 114310840
NCBI-ProteinID: XP_028112739
LinkDB
Position
Unknown
AA seq 883 aa
MASVSLKKNYRCVQSLQQFYSGGPFAVSSDGSFLICACNDTIKIVDSSNSSIKSTIEGDS
EPITALALSPDNTFLFSASHSRQIRVWDLSSLKCLRSWKGHEGPVMGMACDASGGLLATA
GADRKVLVWDIDGGFCTHFFKGHKGVVTSIMFHPDPNRLILFSGSDDATVRVWDLATKKC
IATLDKHFSAVTSMAVSEDGWSLLSAGRDKVVNVWDLRDYGCKITVPTYEVLEAVCVIPS
ASPFTSCLDLYKQQHGKKSASSAIYFITIGERGIVRLWNSEGAGCLFEQKTSDVTVQTDE
EDLKRGFIAAVMLPSDQGLLCVTADQQFLFYSPTVYPEGCLKLTLSKRLVGYNEEIVDMK
FLGEDEQFLAVATSVEQVRVYDLASMSCSYVLAGHTDIVLCLDTCVPSSGRALIVTGSKD
NSVRLWEAESTHCLGVGVGHMGAVGAVAFSKKQRNFFVSGSSDRTLKVWSLDGLSGAEQH
LKAKAAVAAHDKDINSLAISPNDSLVCSGSQDRTACVWKLPDLVSVVVLRGHKRGIWSVE
FAPVVQCVITASGDKTIKIWDISNGSCLKTFEGHTSSVFRASFLTRGTQFVSCGADGLVK
LWTIKTDECIATYDQHEDKVWALAVGKKTEMIATGGSDAVVNLWHDSTAFDKEEDFRKEE
EGVLRGQELENAVSDADYTKAIQIAFELRRPHKLFELFTELCRKREAEVQIDKALHDLGK
EQFLQLLEYVREWNTKPKLCHIAQFVLFRVFNIIPPTEIVEIRAIGQLLEGLIPYCQRHF
SRIDRLERSTFLLDYTLMGMSVIEPEMEGREVKDVPALQSNTKDADEELLTEIADKEEKQ
TDEVKERASNSSKKRKSNKSRDVAYKKVKGAAHAKVSAVSSPA
NT seq 2652 nt   +upstreamnt  +downstreamnt
atggcgtctgtgagcttgaagaagaactaccgctgtgttcaatctctgcaacaattctat
tccgggggaccctttgccgtctcatccgatggatctttcctcatatgcgcttgcaacgac
accatcaagattgtcgattcttcaaactcatccattaaatccaccatcgaaggcgattca
gagcctatcactgccctcgctcttagccccgacaacacttttctcttctctgccagccac
agtcgccaaattagggtttgggacctctcctccctcaaatgtttgcgttcttggaaggga
cacgaaggacccgtgatgggcatggcttgtgacgcctcgggtggattgctagcgacggcg
ggagctgataggaaagtacttgtgtgggacattgatggcggattctgtacacatttcttt
aaaggccataaaggtgttgtgactagtatcatgtttcatcctgacccgaatcgactgata
cttttttctggaagtgatgatgcaactgttcgagtctgggatcttgcaaccaagaaatgc
attgcaacgttagacaagcatttctcagcagtaacttccatggcagtatctgaagatgga
tggtccttgctcagtgctggaagagataaggttgtaaacgtgtgggatcttcgtgactat
ggctgcaagatcactgtaccaacatatgaggtgctcgaagctgtgtgtgtaatcccttct
gcatctcctttcacttcttgtctggatttgtacaaacagcagcatgggaagaaaagtgct
tcatcagcaatttattttatcacaattggtgaacgtgggattgtacggctatggaactcc
gagggtgcaggttgcctttttgagcagaagacttcagatgttactgtccaaactgatgag
gaagacttgaaaagaggcttcattgctgctgtcatgttaccctcagatcaaggattgctg
tgtgtcacagctgaccaacagtttctcttctattcgccgactgtgtatcctgaaggttgt
ttgaagttaaccctaagcaaaaggcttgtaggatacaatgaagaaatagtggatatgaaa
tttctgggtgaggatgaacaatttcttgctgttgccacgagtgttgaacaggtccgagtg
tatgaccttgcatccatgtcatgttcctatgtgttggcaggtcatactgacattgttcta
tgccttgatacctgtgtaccaagttctggaagagcgcttattgtgacgggaagcaaggac
aacagtgttaggttatgggaagctgaaagcacacattgtcttggagttggcgtaggtcat
atgggagctgttggagctgttgctttctcgaagaagcagcggaacttctttgttagtggc
agtagtgaccgtacccttaaggtctggagcttggatggtctctcaggcgcggaacaacat
ttgaaagcaaaagcagctgtagcagcacatgataaggatataaattctctggccatttcc
ccaaatgatagtcttgtttgcagtggatcccaggaccgcactgcttgtgtatggaagctt
ccagacctagtatcagtggtggttttaagaggtcacaaaagaggaatttggtcagtagag
tttgctccagttgttcaatgtgttataacagcgtctggagataaaacaataaagatatgg
gatatatctaatggttcatgtctaaaaacatttgaagggcatacatcaagtgtatttaga
gcatcattccttactcgtgggacccagtttgtttcatgtggtgctgatggcttggtgaag
ctgtggacaattaaaactgacgaatgcattgcaacttatgatcaacatgaggataaggtt
tgggccttagctgttgggaagaagacagaaatgattgcaactggtggcagtgatgcagtt
gtcaatttgtggcatgattctactgcttttgataaagaggaagatttccgtaaagaagag
gaaggggttttaagaggtcaagaactagaaaatgctgtatcagatgctgactacaccaaa
gcaatccaaattgcctttgagcttcgcagacctcataaactttttgagttattcactgaa
ctctgcaggaagagagaggctgaagttcagatagataaagcgcttcatgaccttggcaag
gaacagtttcttcaactccttgaatatgtccgcgaatggaatacaaagccaaaactttgt
catattgcacagtttgttcttttccgggttttcaacatcattccaccaacggagattgtt
gagataagagccattggacaattactggaaggtcttatcccatattgccagaggcatttc
agtaggatagacaggctggagagaagcacattcctcttggactacactctgatggggatg
tcggttattgaaccagaaatggagggaagagaggtgaaagatgtgcctgcactgcaatca
aatactaaggatgcagatgaggagctattaacagaaatagctgataaggaggaaaagcag
actgacgaggtaaaagagagagcctcgaactcttcaaagaaacggaaatcaaacaaatct
agagacgttgcatataagaaagtgaagggggcggctcatgccaaagtttcagctgtttca
tccccggcatga

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