Camellia sinensis (tea plant): 114310840
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Entry
114310840 CDS
T07364
Name
(RefSeq) transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114310840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csin03009
]
114310840
Ribosome biogenesis [BR:
csin03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
114310840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML_2
Utp13
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
NBCH_WD40
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Nup120_160
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD_LRWD1
PEP5_VPS11_N
Beta-prop_HPS5
Beta-prop_Vps41
WD40_like
Nucleoporin_N
Ge1_WD40
Beta-prop_WDR75_2nd
PROPPIN
Nbas_N
SGL
Cytochrom_D1
WDR54
Motif
Other DBs
NCBI-GeneID:
114310840
NCBI-ProteinID:
XP_028112739
LinkDB
All DBs
Position
Unknown
AA seq
883 aa
AA seq
DB search
MASVSLKKNYRCVQSLQQFYSGGPFAVSSDGSFLICACNDTIKIVDSSNSSIKSTIEGDS
EPITALALSPDNTFLFSASHSRQIRVWDLSSLKCLRSWKGHEGPVMGMACDASGGLLATA
GADRKVLVWDIDGGFCTHFFKGHKGVVTSIMFHPDPNRLILFSGSDDATVRVWDLATKKC
IATLDKHFSAVTSMAVSEDGWSLLSAGRDKVVNVWDLRDYGCKITVPTYEVLEAVCVIPS
ASPFTSCLDLYKQQHGKKSASSAIYFITIGERGIVRLWNSEGAGCLFEQKTSDVTVQTDE
EDLKRGFIAAVMLPSDQGLLCVTADQQFLFYSPTVYPEGCLKLTLSKRLVGYNEEIVDMK
FLGEDEQFLAVATSVEQVRVYDLASMSCSYVLAGHTDIVLCLDTCVPSSGRALIVTGSKD
NSVRLWEAESTHCLGVGVGHMGAVGAVAFSKKQRNFFVSGSSDRTLKVWSLDGLSGAEQH
LKAKAAVAAHDKDINSLAISPNDSLVCSGSQDRTACVWKLPDLVSVVVLRGHKRGIWSVE
FAPVVQCVITASGDKTIKIWDISNGSCLKTFEGHTSSVFRASFLTRGTQFVSCGADGLVK
LWTIKTDECIATYDQHEDKVWALAVGKKTEMIATGGSDAVVNLWHDSTAFDKEEDFRKEE
EGVLRGQELENAVSDADYTKAIQIAFELRRPHKLFELFTELCRKREAEVQIDKALHDLGK
EQFLQLLEYVREWNTKPKLCHIAQFVLFRVFNIIPPTEIVEIRAIGQLLEGLIPYCQRHF
SRIDRLERSTFLLDYTLMGMSVIEPEMEGREVKDVPALQSNTKDADEELLTEIADKEEKQ
TDEVKERASNSSKKRKSNKSRDVAYKKVKGAAHAKVSAVSSPA
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgtgagcttgaagaagaactaccgctgtgttcaatctctgcaacaattctat
tccgggggaccctttgccgtctcatccgatggatctttcctcatatgcgcttgcaacgac
accatcaagattgtcgattcttcaaactcatccattaaatccaccatcgaaggcgattca
gagcctatcactgccctcgctcttagccccgacaacacttttctcttctctgccagccac
agtcgccaaattagggtttgggacctctcctccctcaaatgtttgcgttcttggaaggga
cacgaaggacccgtgatgggcatggcttgtgacgcctcgggtggattgctagcgacggcg
ggagctgataggaaagtacttgtgtgggacattgatggcggattctgtacacatttcttt
aaaggccataaaggtgttgtgactagtatcatgtttcatcctgacccgaatcgactgata
cttttttctggaagtgatgatgcaactgttcgagtctgggatcttgcaaccaagaaatgc
attgcaacgttagacaagcatttctcagcagtaacttccatggcagtatctgaagatgga
tggtccttgctcagtgctggaagagataaggttgtaaacgtgtgggatcttcgtgactat
ggctgcaagatcactgtaccaacatatgaggtgctcgaagctgtgtgtgtaatcccttct
gcatctcctttcacttcttgtctggatttgtacaaacagcagcatgggaagaaaagtgct
tcatcagcaatttattttatcacaattggtgaacgtgggattgtacggctatggaactcc
gagggtgcaggttgcctttttgagcagaagacttcagatgttactgtccaaactgatgag
gaagacttgaaaagaggcttcattgctgctgtcatgttaccctcagatcaaggattgctg
tgtgtcacagctgaccaacagtttctcttctattcgccgactgtgtatcctgaaggttgt
ttgaagttaaccctaagcaaaaggcttgtaggatacaatgaagaaatagtggatatgaaa
tttctgggtgaggatgaacaatttcttgctgttgccacgagtgttgaacaggtccgagtg
tatgaccttgcatccatgtcatgttcctatgtgttggcaggtcatactgacattgttcta
tgccttgatacctgtgtaccaagttctggaagagcgcttattgtgacgggaagcaaggac
aacagtgttaggttatgggaagctgaaagcacacattgtcttggagttggcgtaggtcat
atgggagctgttggagctgttgctttctcgaagaagcagcggaacttctttgttagtggc
agtagtgaccgtacccttaaggtctggagcttggatggtctctcaggcgcggaacaacat
ttgaaagcaaaagcagctgtagcagcacatgataaggatataaattctctggccatttcc
ccaaatgatagtcttgtttgcagtggatcccaggaccgcactgcttgtgtatggaagctt
ccagacctagtatcagtggtggttttaagaggtcacaaaagaggaatttggtcagtagag
tttgctccagttgttcaatgtgttataacagcgtctggagataaaacaataaagatatgg
gatatatctaatggttcatgtctaaaaacatttgaagggcatacatcaagtgtatttaga
gcatcattccttactcgtgggacccagtttgtttcatgtggtgctgatggcttggtgaag
ctgtggacaattaaaactgacgaatgcattgcaacttatgatcaacatgaggataaggtt
tgggccttagctgttgggaagaagacagaaatgattgcaactggtggcagtgatgcagtt
gtcaatttgtggcatgattctactgcttttgataaagaggaagatttccgtaaagaagag
gaaggggttttaagaggtcaagaactagaaaatgctgtatcagatgctgactacaccaaa
gcaatccaaattgcctttgagcttcgcagacctcataaactttttgagttattcactgaa
ctctgcaggaagagagaggctgaagttcagatagataaagcgcttcatgaccttggcaag
gaacagtttcttcaactccttgaatatgtccgcgaatggaatacaaagccaaaactttgt
catattgcacagtttgttcttttccgggttttcaacatcattccaccaacggagattgtt
gagataagagccattggacaattactggaaggtcttatcccatattgccagaggcatttc
agtaggatagacaggctggagagaagcacattcctcttggactacactctgatggggatg
tcggttattgaaccagaaatggagggaagagaggtgaaagatgtgcctgcactgcaatca
aatactaaggatgcagatgaggagctattaacagaaatagctgataaggaggaaaagcag
actgacgaggtaaaagagagagcctcgaactcttcaaagaaacggaaatcaaacaaatct
agagacgttgcatataagaaagtgaagggggcggctcatgccaaagtttcagctgtttca
tccccggcatga
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