KEGG   Camellia sinensis (tea plant): 114311250
Entry
114311250         CDS       T07364                                 
Name
(RefSeq) THO complex subunit 4D-like
  KO
K12881  THO complex subunit 4
Organism
csin  Camellia sinensis (tea plant)
Pathway
csin03013  Nucleocytoplasmic transport
csin03015  mRNA surveillance pathway
csin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    114311250
  09122 Translation
   03013 Nucleocytoplasmic transport
    114311250
   03015 mRNA surveillance pathway
    114311250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csin03019]
    114311250
   03041 Spliceosome [BR:csin03041]
    114311250
Messenger RNA biogenesis [BR:csin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     114311250
    TREX complex
     114311250
Spliceosome [BR:csin03041]
 Complex C
  Other components
   EJC/TREX
    114311250
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    114311250
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_3 RRM_9
Other DBs
NCBI-GeneID: 114311250
NCBI-ProteinID: XP_028113182
LinkDB
Position
Unknown
AA seq 261 aa
MASLDMSLDDMIKNRRSSERGRGRGRGQRGRGPIGSFSGGRMTGPPRRGPLRVNTRPSSY
VIAKSFRRTKNFPWQRDLFEDSLRAAGLNGVENGTKLYISNLDIGVTNEDIKELFSEIGQ
LKRYTVHYDKNGRPSGSAEVVFVRRSDAFQALKRYNNVQLDGKPMRIEIIGTNSEVAVSA
RVNVVGGVNGRRTVVMPAGRGRGSAAVNRQSGQRSRGGLWNGRGRARGRGRGGRGMKKGM
DKSVDDLDKELDNYHAESMQT
NT seq 786 nt   +upstreamnt  +downstreamnt
atggcttctcttgatatgtctcttgatgacatgataaagaaccggcggagtagcgagaga
ggtagaggacgaggaaggggccaacgtggtcgagggccaatagggtcattcagtggtgga
agaatgacagggccacctcgcagaggtccactaagggtgaatactcggccatcatcttac
gtcattgccaagtctttccgcagaacgaagaattttccatggcaacgtgatttgtttgaa
gacagccttagagctgcagggttaaatggagttgaaaatggtacaaagttatacatttcg
aacttggacattggagtgaccaatgaagatataaaggaacttttctctgagattggacaa
ctgaaacgatatacagttcattatgacaaaaatggtcgcccaagtggttcagctgaagta
gtatttgtccgacgaagtgatgcgtttcaagctcttaagcggtataacaatgttcaattg
gatggaaagcctatgaggattgaaataataggcaccaactcagaggttgctgtttcagct
cgtgtcaatgtagttggaggtgtaaatgggaggcggactgttgttatgcccgcaggtcgt
ggcagaggctctgctgcagttaatcgtcaatctggtcagaggagccgaggtggtttgtgg
aatggccgtggacgtgctcgtgggcgaggccgtggtggtcgagggatgaagaaaggcatg
gataaatcagttgatgatcttgacaaggaactggataattaccatgctgaatctatgcaa
acatga

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