Camellia sinensis (tea plant): 114312005
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Entry
114312005 CDS
T07364
Name
(RefSeq) exosome complex exonuclease RRP46 homolog isoform X1
KO
K12590
exosome complex component RRP46
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114312005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114312005
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
114312005
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
114312005
NCBI-ProteinID:
XP_028113960
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MEVDRVDGRTPNQLRPLACSRNTLNRAHGSATWSQGETKVIAAVYGPKAGTKKNENPEKA
CIEVVWKPKTGQIGKPEKEYEMILKRTLQSICLLTINPNTTTSVIVQVVNDDGALLPCAI
NAACAALVDAGIPLKHLAVAICCCLAESGYIILDPNKLEEQKMKAFVYLVFPNSILSVLP
GASLQVGDEPMEHGLITSVTHGVMSVSRTRSGCKCKVVWISQEKFAAAGVQVISPMPSDF
DMIARGCRF
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggaagtagatagagtggatggtcgcacaccgaaccaattgagaccgctcgcttgttct
cgtaacacactcaatcgtgctcatggctctgccacttggtctcaaggggaaacgaaagtt
attgctgcagtatacgggccgaaagcaggaaccaagaagaatgaaaaccctgaaaaggct
tgcatcgaagttgtctggaagcccaagactgggcagattgggaaaccagagaaggagtat
gagatgatcctcaaaaggactttgcaaagtatctgtcttttgactatcaatccaaatacc
acaacctcagttatagttcaggttgttaatgatgatggtgctcttctcccatgtgcaata
aatgctgcatgtgctgcccttgtggatgctggaattcctttgaagcatcttgcagttgca
atatgttgttgtctggcagaaagtggatacattatactggacccgaacaagctagaagag
cagaaaatgaaggcatttgtgtatttagttttcccaaactcgattctctctgtccttccg
ggagcatcattacaggtgggagatgagccgatggaacatgggctaattacgtctgttaca
catggtgtaatgtcagtgtctagaacgaggtcgggctgcaagtgcaaagttgtctggatt
tctcaggagaagtttgcagctgcaggtgtccaagtaatttctccaatgccgagtgatttt
gacatgattgcaagggggtgtagattctga
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