Camellia sinensis (tea plant): 114312011
Help
Entry
114312011 CDS
T07364
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1-like
KO
K14485
transport inhibitor response 1
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
114312011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csin04121
]
114312011
Ubiquitin system [BR:
csin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
114312011
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
LRR_4
F-box-like
LRR_6
F-box
DUF3630
COMMD1_N
Motif
Other DBs
NCBI-GeneID:
114312011
NCBI-ProteinID:
XP_028113968
LinkDB
All DBs
Position
Unknown
AA seq
580 aa
AA seq
DB search
MDPKRMKDSSESTRFSPFPDEVLEGVLSLLKSHKDRSSVSLVCRDWYNAERWTRTHVFIG
NCYSVSPEIVARRFPKIRSVTLKGKPRFSDFNLVPENWGADIHQWLVVFADSYPFLEELR
LKRMTVTDESLEFLATRFPNFKALSLLSCDGFSTTGLSAIATRCKNLTELDIQENGMEDN
GGGWLSCFPESFTSLEVLNFSSLHSDVSFDALERLVARCKSLSVLKVNKNVNLKQLQRLL
VRAPQLMELGTGNFQQELAPRQYVELESAFSNCKNLHTLSGLWEATALYLPVLYPACASL
AFLNLSYSTLRSGELAKLLAYCPNLRRLWVLDTVEDKGLEAVGSSCPLLEELRVFPANPY
DEDMHHGVTESGFIAVSHGCRKLHYVLYFCQQMTNAAVVTIVQNCPDFTHFRLCIMNPHQ
PDYLTNEPMDEAFGAVVKTCTKLQRLAVSGLLTDLTFEYIGKYAKNLETLSVAFAGNSDW
GMQSVLRGCPKLRKLEIRDSPFGNGALLSGLKKYESMRSLWMSACKVTMNGCRLLANEMP
RLNVEVMKDDESDDSQADKVYVYRSVAGPRRDAPPFVLTL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatccgaagaggatgaaggactcgtccgagtcgactcgtttttcgccatttccagac
gaagttctcgaaggagttctctctcttttgaagtcccacaaagatcgaagctcagtctct
ctcgtctgcagagactggtacaacgccgagcgatggactcgaacccacgtattcatcggc
aactgttactctgtctctcctgagatcgtcgctcgtagattccccaagattcgaagcgta
accctaaaagggaaacctaggttttcggatttcaatctggttcctgagaattggggagct
gatattcatcaatggctcgttgttttcgctgattcgtacccgtttttggaggaattgagg
ttgaagaggatgactgtgaccgatgagagcttggagttcttggcgactaggttccctaat
ttcaaagctctttctcttttgagctgtgatgggtttagcactactggcctctcagctatt
gccactcgttgcaagaacttgactgaacttgacatacaggagaatggcatggaggataat
ggtggaggttggttaagttgctttcctgaaagcttcacatcattagaagtactgaacttc
tccagcctgcacagtgatgtcagttttgatgcccttgagagacttgttgctaggtgcaag
tcattaagtgttttgaaggtcaataagaatgtcaacttgaaacaattacagaggctactt
gtacgggctcctcagttgatggagcttggtactggaaactttcaacaagaacttgcaccg
cgccagtatgtagagcttgaaagtgcattcagcaactgcaaaaatctgcacaccctatca
ggtttatgggaagctacagccctttatcttcctgttctttacccagcttgtgcgagtctg
gcattcttgaatttgagttattcaactcttcgaagtggtgaacttgccaagcttcttgct
tactgcccaaatctaagacgtctctgggttctggacacagtagaagacaaggggctggaa
gctgttgggtccagctgccccttgcttgaggaactccgtgtcttccctgcaaatccctat
gacgaggacatgcaccatggtgtgactgagtcgggttttattgccgtgtctcatggttgt
cgcaaactccactatgtcctctacttttgccagcagatgactaatgctgccgtggtcacc
atagttcagaactgcccagatttcacccacttccgactctgtataatgaacccacaccag
ccagattacctcaccaacgaacctatggacgaggcttttggtgcagtggtaaagacttgt
actaagcttcagaggcttgctgtttcaggcctcttaactgacttgacatttgagtatatt
gggaagtatgcgaaaaacctagagaccctttcggtggcttttgctggcaacagtgattgg
gggatgcaaagtgttctacgaggttgtccgaagctcaggaagcttgagataagagacagt
ccatttgggaatggagctcttctttcgggtttgaagaagtatgaatcaatgcggtctctc
tggatgtcagcgtgcaaggtgactatgaatgggtgtagattactggcaaatgagatgccg
aggttaaatgttgaggtaatgaaagatgatgagagtgatgacagccaggctgataaagtt
tatgtctaccgttctgtagcagggccaagaagggatgctccaccttttgttctcactctc
taa
DBGET
integrated database retrieval system
