Camellia sinensis (tea plant): 114312366
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Entry
114312366 CDS
T07364
Name
(RefSeq) uncharacterized protein LOC114312366
KO
K06100
symplekin
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114312366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csin03021
]
114312366
03019 Messenger RNA biogenesis [BR:
csin03019
]
114312366
Transcription machinery [BR:
csin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114312366
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
114312366
U7-dependent histone pre-mRNA processing factors
114312366
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
CRM1_C
Motif
Other DBs
NCBI-GeneID:
114312366
NCBI-ProteinID:
XP_028114402
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MSGPSREQALSLLAQANNHGDLAVKLSSLKQAKDILASSSDPSLASELFPYLVELQYSPE
FLVRKSLIEAVEEIGLKAMKHSSILMPVLLATLHDNDSIVVRQSIVSGTNIFCCILEELS
LQFHQHGIVERWLEELWTWMVKFKDAVFGILWEAGSVGTKLLALKFLETYVLLFTSGTGD
TEKPASEAVPRNGRAFNVSLLVDGHPVLDPVALTSKANRSLGILLDLLHSASSLPGPLII
SVVNCLAAIARKRPLHYNFVLSALLDFEPNFETVKGGHMASIQYSLRTAFLGFLRCTYPV
IVESRDRLLRALRGMNAGDAADQVIRQVDKMMKNNERALRDARLTKDDQPSSQLPVAGDA
VRKRYMPLENEEPDNGYDMASKRIRRGPSNHSDPPVQINDSGHDLAVNGVSSKVPLLDSG
LTPVEQMIAMIGALIAEGERGAESLEILISQLHPDLLADIVITNMKHLPTNPPPLTRLSS
VTQQSGSSGPPSVAVPIGSTASIQSPVLAVQTPSSSSNVISTSIADMSISINLLADSKRD
PRRDPRRLDPRRAAISVEVPPTPTVEDTNDMKSEFVSSLPVVTSVENTSVSLMPKMEVDL
QILESPVVYRSDPVVSRSDPVDSRSDQPPPKGVVFDEEATEIVPVLEVNTALDPAVSPVH
EDDEDLVASKPSCIAATNEENTSALLQCDQLSPSDSNMTVSEEACPDLPVLPSYTELTEE
QQRNVKKLAVERIIESYKHLRGTDCSQTRMALLARLVAQIDGDDDVALMMQKHIVSDYQY
QKGHELAMHVLYHLHTLMISSSVEQSSFATGVYEKFLLGVARSLLDALPATDKSFSRLLG
EVPFLPDSALKLLDNLCYSSYHCGKDSRDGDRVTQGLGAVWSLILGRPLNRQACLDIALK
CAVHSQDEIRAKAIRLVANKLYSLNHISEDIERFATNMLLSAVDQRVSDVELSQSVFTEQ
RTEGERGSQETSVSGSQFSEPGTSENDSLKGAQSDSQTDSSVSFAEAQRLISLFFALCTK
KPSQLQLVFDNYARAPKAVKQAIHRHIPILMRALGSAYSELLRIISDPPQGSENLLTQVL
HILSEGTTPTADLIATVKHLYETKLKDATILIPMLSSLSKTEVLPIFPRLVDLPLDKFQA
ALAHILRGSAHTGPALTPAEVLVAIHDITPEKDGLALKKITDACTACFEQRTVFTQQVLA
KALNQMVDQTPLPLLFMRTVIQAIDAFPSLVDFVMEILSKLVSKQIWRMPKLWVGFLKCV
SQTQPHSFRVLLQLPPPQLESALNKYANLRGPLAAYASQPRIRTSLPRSTLIFLGLANES
HMQQPHAPASLHASDTGSSVHGATLT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaccttcgcgagagcaagcgctctctctccttgcacaggccaacaaccacggc
gatttggctgtaaagctctcttctttgaaacaggctaaagatatcttggcttcttcctcc
gacccttctcttgcttccgaactcttcccctatttggtcgaacttcaatattctcccgaa
tttctcgttcgtaaatccctcatcgaggcggtggaggagattggtttgaaagcaatgaaa
cactcttcaatattaatgccagtcttattggcgactttacatgataatgattctattgtt
gtaagacaatccattgttagtggcaccaatattttttgctgcattttggaggagttgtca
ttgcagtttcaccagcatggtatagttgagaggtggcttgaagagctttggacatggatg
gttaagttcaaggatgctgtctttggcattctgtgggaggctggttctgttggtacgaag
ctgctggctttgaaatttttggagacatatgttttactttttacgtctggcaccggtgat
actgaaaagcctgcctcagaagctgtaccaagaaatggacgggcttttaatgtttcattg
ctggttgatggtcaccctgttttggatccagttgcacttacatcaaaggcaaatagatct
cttggcatcctactggatttgttgcactcggccagtagtctgcctggacccttgataata
tctgttgttaattgtcttgcagccatagcaaggaagaggccactccactataattttgtt
ctttctgcattgcttgattttgaaccaaactttgagacagtgaagggaggtcatatggcc
agtattcagtattctttaagaactgcttttctggggttccttaggtgcacttatcctgtc
attgtggagtcaagagatagattgcttagggcactacgaggaatgaatgctggggatgcc
gctgatcaagttatccgtcaagttgataaaatgatgaaaaataacgagcgtgctttgcgt
gatgcacggttgaccaaggatgatcaaccatcaagtcagctgcctgttgctggagatgcc
gtaagaaaaaggtatatgcctctggaaaatgaagagccagacaacggttatgatatggct
tccaaaagaattcgtcgtggtcctagtaaccactctgatccaccagttcaaataaatgat
tctgggcatgatttagctgttaatggagtatcttctaaggttcctttgttggacagtggc
ctgactcctgttgaacaaatgattgccatgattggtgctttaattgcagaaggagaaaga
ggtgctgaatcacttgaaattctaatatctcaactccatcctgatttgttggctgatatt
gtcataactaatatgaagcacttgcctacaaaccctccaccattaacgagacttagtagc
gtaactcaacaaagtggttcaagtggtccaccttcggttgctgtgccaattgggtccaca
gcttctattcagtctccggtgcttgcagtacaaacaccttcctcttcatctaatgtgatc
agcacatctatagcagacatgtctatttccatcaacctcctagcagattctaaacgtgat
ccaagaagggatccccgtcgccttgacccacgacgtgcagcaatatctgttgaagtgcca
ccaacgcctactgtggaggatactaatgatatgaaatctgagtttgtttcttcactccct
gtggtcacaagtgttgaaaatacttcggtgtctctgatgcccaaaatggaagtcgatttg
caaatattagaaagtccagttgtttatagaagtgatccagttgtttccagaagtgatcca
gtagattctagaagtgatcaaccacctcctaagggggtggtttttgatgaagaagccact
gaaattgtccctgttctggaggtcaatactgctttagatcctgcagtttctcctgttcac
gaagatgacgaggacttggtggcatcaaagccatcatgtattgcagcaacaaacgaggaa
aatacatcagctctgttacaatgtgatcagctttctccctctgattcaaacatgaccgtc
tctgaagaggcttgtcctgatttacctgtgcttccatcttacactgagctgacagaagaa
cagcagagaaatgtgaaaaagttggctgttgaacggattattgaatcatacaagcatcta
cgagggacagattgtagccagacacgcatggcactgcttgctcgtttggttgctcagatt
gatggtgatgatgatgtggctttgatgatgcaaaagcatatcgtctcagattaccaatac
cagaaggggcatgagcttgctatgcatgtactgtaccatctgcatactctcatgatctcc
agttcagttgaacaatcttcatttgctactggtgtatatgaaaaatttctcctgggagtg
gcgaggtctttgctggatgctctgccagctactgacaaatcttttagtcgacttctgggt
gaagttccatttttgcctgattctgcattaaaattgttggacaatttatgctactctagt
tatcactgcggaaaagatagtcgtgatggtgatcgtgtgactcagggccttggtgctgtg
tggagcttgattttggggcgtccactaaatcggcaagcctgcttagatattgctttgaag
tgtgctgttcattcacaagatgaaattcgtgcaaaagctatccgactggtagcaaataaa
ctctattcccttaaccacatttcagaagatattgagagattcgcgacaaatatgttgttg
tcagctgttgatcagcgtgtttctgatgtagagctttcacaatctgtgttcactgaacaa
agaacagaaggggagagaggaagccaggagacatctgttagtggttctcaattttcagag
cctggaacatctgaaaatgactccttgaagggtgcacaatctgactcccaaactgattcc
tcagtttcatttgctgaagcgcaacgccttatttctttgttttttgctttatgtacaaag
aaacctagtcaacttcaacttgtatttgataattatgcacgagctccaaaggctgttaag
caggccatccatcgccacattcctattcttatgagggccctagggtccgcatattctgaa
ttgctccgtattatatctgatccaccacagggaagtgaaaatcttctgacacaggtgcta
catattttgtctgaagggacaacacctactgctgatctgattgccactgttaaacactta
tatgaaactaaactaaaggatgctacgattcttattccaatgctgtcatccttgtccaaa
actgaggttttaccaattttccctcggcttgtcgaccttccactggataagtttcaggca
gcacttgctcatatactccggggttcagcacatacaggcccagcattgacaccagcagaa
gttttggttgcaatccatgacattactcctgagaaagatggccttgcacttaaaaagatt
acagacgcttgcactgcttgctttgagcagcgcacagttttcacacagcaggtcttggca
aaggccttgaaccagatggttgaccaaacccctctacctctgctcttcatgaggacagtg
attcaagcaattgatgcttttccctcactggttgattttgtcatggaaatactttccaag
cttgtgagtaaacagatttggagaatgccaaaattatgggttgggttcctaaaatgtgtc
tctcagacacaaccacattctttccgcgtattgttacagttaccaccaccacagcttgaa
agtgctctcaacaagtatgctaacctcagaggtccccttgctgcttatgccagccaacct
agaataaggacttcactacctaggtcaactctgatatttcttggccttgcaaatgaatca
catatgcagcaaccgcatgccccagcttctttgcatgcttcagacacaggttcttcagtt
catggtgcgacactgacatga
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integrated database retrieval system
