Camellia sinensis (tea plant): 114312625
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Entry
114312625 CDS
T07364
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
csin
Camellia sinensis (tea plant)
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114312625
03036 Chromosome and associated proteins [BR:
csin03036
]
114312625
Enzymes [BR:
csin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
114312625
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
114312625
Chromosome and associated proteins [BR:
csin03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
114312625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
DEAD
AAA_16
UvrD-helicase
AAA_22
Viral_helicase1
Mov-10_helical
Helicase_RecD
SLFN-g3_helicase
NPHP3_N
LTD
Motif
Other DBs
NCBI-GeneID:
114312625
NCBI-ProteinID:
XP_028114684
LinkDB
All DBs
Position
Unknown
AA seq
885 aa
AA seq
DB search
MSTICGNWDEFSSIPDRGEIGFIDYDDDKSVCSYNPDEEGPIVVSVPFPVVNGKPQSISV
GETASDLITIRNTTMEPVELWKVDIYDSNPKDSFTISLMEPPSPTSDMEYIREFLEYFCL
DDRVLQPGQTLSVWLSCKPKGVGLHTTAVHFDVGDDRIERVVLLLAEDKISKSLASNKPY
RRDRKKKPLVVDAYAVDAYVLGARPAKASTRGPRFCLPSYPIPKDIRKLVENKDIPTGIT
EGLKKENYCNYFTTLLNMEEIKMEEDMRGYDMECIVFGKKGPFLTLEVPGLAEKRPSLVC
GDFIYAKLASEDANDRTRPYQGYIYRVEAEEVHLKFDEEFHFHHKAGKPYNVQFTYNRIN
MRRLYQAVEASKGLETEFLFPSESTRKRLIRPPRLPPMSSVFNEEQNHAIRMILGCKEGP
PYVIHGPPGTGKTVTLVGAILQLYTERNDAQVLVCAPSNSAADLILEKLLCEKVVAVEER
DILRLNAPSRSIEDIKSDFHCFCFFEESAFTCPPLKKLIRYKIVISTYMSAALLYAEGVR
RGHFSHIFLDEAGQASEPDTMIPVSQLCRRGTVVVLAGDPMQLGPVIHSKDAETYGLGKS
YLSRLFECELYDPGNENYVTKLVRNYRCHPEILYLPSQLFYNGELIAFKDDSDSSVTWVD
LLPNMEFPLLFIGIQGYDEREGNNPSWFNRFEASKVVEIITKLTEKKGLNGEDIGVITPY
RQQVLKLSNTLESLGCSGIKVGSVEQFQGQERQVIIISTVRSTVKHNEFDRFHCLGFLSN
PRRFNVAITRARSLLIVIGNPHIIGKDLYWNMFLWRCVDNGSYQGCPLPERQNSPQECPA
EENNLGYEEENPQPSDEVECEEQTHQAEEFNEPVFDETEWSDGWK
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgatttgcgggaattgggatgagttctcttcgatcccagacagaggagaaatt
gggttcattgattacgatgatgataaatcagtgtgtagttacaacccagatgaagagggt
ccaatagtagtatctgttccattccctgttgtaaatggaaaacctcaatctatatcggtt
ggagaaaccgctagtgatctgatcaccattaggaacaccaccatggaaccggttgaactc
tggaaggttgatatctatgactcaaatccaaaggactcattcaccatttctctgatggaa
cctccatcaccaacttcagacatggagtacatccgagaattcctagagtacttttgcttg
gatgacagagtgttacagcctggtcaaactttaagtgtttggctatcttgcaaacctaag
ggagttggcttgcacacaacagcagtgcattttgatgtaggggacgacagaattgaacgg
gtggtccttcttttggcagaagataaaatctccaagtctttggcttcaaacaagccatac
cgtagagataggaaaaagaaaccgttggttgtagatgcatacgctgtggatgcatatgtt
ctgggtgcacgtcctgcaaaggcttcaacccgagggcccagattttgcttgccttcatat
ccgatcccaaaggatatccgaaaattggtcgagaataaagatatccctactggtatcaca
gaaggtttgaaaaaagaaaattattgcaattacttcactactctgttgaacatggaagaa
atcaaaatggaggaagacatgaggggttatgacatggagtgcatcgtttttgggaagaag
ggaccatttttgacccttgaggtcccaggactagctgagaaacggccttcacttgtgtgt
ggagattttatatatgctaagcttgcctctgaagatgcaaatgacagaactcgtccctat
cagggttatatctaccgtgttgaggctgaagaagtacatttgaagtttgatgaagaattt
cactttcatcacaaagctgggaaaccctataatgtacagttcacctataatcgaataaac
atgagaagattatatcaggccgttgaagcttctaaaggtttagaaacagagtttctcttc
ccaagtgaatcaactagaaagagactgattagacctcctcgactgcccccaatgtcttct
gttttcaatgaggagcagaaccatgcgattaggatgatacttggttgcaaagaagggccg
ccttatgtgatccatgggcctccaggtacaggcaagaccgtgacactcgtaggagcaatc
cttcagctctatacagagcgaaatgatgcccaggttcttgtctgtgcaccttcgaatagt
gcagccgatcttatactcgagaaactgctttgtgagaaggttgttgcggttgaagagaga
gatattcttaggctcaatgcaccttctcgatctattgaagatattaagtctgattttcac
tgcttttgtttctttgaagagtcagccttcacatgtcctccactcaagaagctaatacgt
tacaaaattgtcatatcgacatacatgagtgctgctcttctttatgcagaaggcgtaagg
cgaggccacttttctcacattttcttggacgaggcgggccaagcttcggagcctgatacc
atgattcctgtatcccaactttgtcgaagggggacagtggttgttcttgctggagaccca
atgcaactaggtcctgtaattcactccaaagatgccgagacttatgggttgggaaagtcg
tacttgtcaaggctgtttgaatgcgagttgtatgatcctgggaatgaaaattacgtcacg
aagctggttcggaattaccgatgtcacccggaaattctgtatcttccttcacaattgttt
tataacggagaattaatcgcattcaaagatgattctgattcctctgtgacttgggtggac
ctccttcctaacatggaatttcctctccttttcattggtatccaaggctatgacgagcgg
gaagggaataatccatcatggtttaatcgatttgaggcaagcaaggttgttgagatcatc
acaaaactgacggaaaaaaaggggttgaatggggaagatattggagtcataacaccttat
cggcaacaagtactcaaattgagtaatacccttgaaagtttgggttgctctggcattaag
gttggcagtgtcgagcaatttcaaggacaagaaaggcaagtaatcattatatctactgtc
cgatcaacggtgaagcacaacgagtttgacagattccattgcttgggatttttgagcaat
cccagaaggttcaatgttgccattacccgtgccaggtctttgctgattgttattgggaac
ccacacatcattggcaaggatttatactggaatatgttcttatggcgttgtgtggataat
ggctcctatcaaggttgtcctctccctgaaaggcaaaattcacctcaggagtgccccgcg
gaagagaacaacttgggctatgaagaagagaaccctcagccatctgatgaagttgaatgc
gaggaacagacccatcaggccgaagagttcaatgaacctgtttttgatgaaactgagtgg
tcggatggttggaagtaa
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