Camellia sinensis (tea plant): 114314767
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Entry
114314767 CDS
T07364
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
csin
Camellia sinensis (tea plant)
Pathway
csin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114314767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csin03019
]
114314767
Messenger RNA biogenesis [BR:
csin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114314767
mRNA degradation factors
5'-3' decay
Decapping complex
114314767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_THOC3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_C
Beta-prop_WDR41
DSE1_N
Beta-prop_EML_2
EIF3I
Motif
Other DBs
NCBI-GeneID:
114314767
NCBI-ProteinID:
XP_028117050
LinkDB
All DBs
Position
Unknown
AA seq
1415 aa
AA seq
DB search
MASPGNPNQARVPFENHKFFKPSPNLPSQTPTTNLSSSPFTPPSYPPLPSASYPPPTGPY
SYPPQTTQTQFHHPQFHIPTPFSQQDHILHLSNLHQRSVSYPTPPLQPPPQNTNAGARLM
ALLSAPPSGLEIGHQPMLPLPPIQPSSSGSSEFSIPPNVPMLNSVPLVPNVNPGLIPHSV
PMHMLSSKLPKGRHLIGDRVVYDIDARLEGEVQPQLEVTPITKYVSDPGLVLGRQIAVNK
TYICYGLKMGAVRVLNINTALRSLLKGLTQRVTDMAFFAEDVHLLAGTSVDGRVYVWKIT
EGPDEEDKPQITGKLVVAIQIVGEGESVLPRVCWHCHKQEVLVVGIGKSVLRIDTMKAGK
GEVYSAEVPLKCPIDHLIDGVQYVGKHEGEVTDLSMCQWMTTRLVSASTDGTIKIWEDRR
AQPLVVLRPHDGQPVNSVTFLTGPHHPDHIILVTAGPLNREVKVWALESEEGWLLPSDAE
SWHCTQTLNLKSSAESRVEEVFFNQVVALSQAGILLLANAKKNAIYAVHLEYGPNPSATR
MDYIAEFTVTMPILSFTGTSDLLPHGVHNVQVYCVQTQAIQQYALDLSQCLPPLLDDVVS
ERLDSSVLRNVTSTEGFATMEPYVSKPTEIQMSSSAPKASIHDTGSESALTVRHPLHSPS
MEAATSAEFTTLSMESRPTPISNVSSNDDIPCVASPPLPLSPRVSRKLSGFRSPTNGFEP
GLVLDDSGGDQEVSEYSVDRQTDSIHTNFSDVPSLDDDSRNNENKVARDDISSFLNHPMN
FKHPTHLVTPSEILRAASSTETALVAEQKTKEEPNIQDVVINSNVHNVEVEVKVVGETGF
SQKNEIGSLRKTHNLVPENKVKAFCSQASDLGIEMARECGALSSEMYIAEESHQLNGANV
SEELTQPSNAEDEVHDFTRDISRKNANSAMPATVSQPVAQITKAKKQKGKNTQGSCPSSP
SPSAFNSADSSSEPGVSSSIPSAEAGFSQIMIMQEMLNQLTTMQKEMQKQMSVMVTVLVT
KEGKRLETALGRSMEKAVKANTDALWAHFQEENAKQEKLVRERTQQITSLITNCINKDLP
AMVEKTVKKELAAVGPAVARAISPAIEKTISTAITEAFQRGVGDKAVNQLEKSVNSKLEA
TVARQIQAQFQTSGKQALQDALKSSLEASVIPAFEMSCKAMFEQVDATFQKGMIEHATVA
QQQFESTHSPLALALRDAINSASSVTQTLSGELADGQRNLVALAVAGANSKAVNPLVTQL
NNGPLGGLHDKIEAPLDPTKELSRLISERKYEEAFTAALQRSDVFIVSWLCSQVDLQGIL
SMIPLPLSQGVLLSLLQQLACDISKDSSRKLVWMTDVAVAINPADPMIAMHVRPIFEQVY
KILNHHRSLPTTSGTEISSIRLVMHVINSMLMTCK
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccctggaaatccaaaccaagcaagagtgccatttgaaaaccacaagttcttc
aaaccctcaccaaaccttccctctcaaacccctacaaccaatttgagttcttcaccattc
acacctccatcttatcctccactcccttctgcttcttatcctccacccactggcccttat
tcataccctcctcagaccacccagacccagtttcatcaccctcaattccacatccctact
cccttttctcagcaagatcatattctccatctttctaacttgcaccagagatctgtctct
tatcctacgccccctcttcaaccccctccccaaaacacgaatgccggggcgagacttatg
gctctgttgagtgccccgccatcgggtcttgagattggacaccaacccatgttgccactg
cctccaattcagccttcctcttctgggtcttctgaattttccattccccccaatgttccc
atgttgaattcggttcctttggtgccaaatgtcaatccgggtttgattccgcattcagtt
cccatgcatatgctgagcagcaagctcccaaagggccgccatttgattggcgatcgtgtc
gtgtacgatattgatgctagattggaaggtgaggttcagccacagctcgaagttactccg
ataaccaagtatgtatcggatcctggacttgttttgggccgccaaattgcagtcaataag
acgtacatttgctatggactgaagatgggagctgtccgggtccttaacataaacacggca
ttgagatcattgcttaaaggtctaacccagagggtcacagacatggctttctttgctgag
gatgttcaccttttagctggtacaagtgtagatgggcgtgtttatgtatggaagattact
gaaggtccagatgaagaagataagccacaaattacaggaaagttagttgttgccattcag
atagtaggagaaggggaatctgttcttccacgggtttgttggcactgtcacaagcaagaa
gttctagtagttgggattggaaaaagtgttctgagaatcgatactatgaaagctggaaaa
ggtgaagtatattcggcagaggtacctctcaagtgtcctattgaccatctgattgatggg
gtccaatatgttggtaaacatgagggagaagtgactgatttgtcaatgtgccaatggatg
actacccgtttggtttctgcttcaacggatggcacgataaaaatttgggaggaccgcaga
gcacaaccgcttgtggtactaaggccacacgatggtcaacctgttaattctgttacattc
ttgactggccctcaccacccggatcacattattcttgtgactgcgggtccactgaatcgg
gaagtgaaggtatgggccttggaaagtgaagaaggctggctgctccctagtgatgctgaa
tcatggcattgtacccagacattgaacttgaagagttcagctgaatctcgagttgaagag
gtgttcttcaatcaggttgtggccttgtctcaagcagggattttgttattagcaaatgcc
aagaagaatgctatatatgctgtacacttagaatatggtcctaatccatcagcaacccga
atggattacattgcagagtttactgtcaccatgccgattttgagttttacagggaccagt
gatttattacctcacggtgtacacaatgttcaggtttattgtgtccagacgcaggctatt
cagcagtatgctttggacttatcccagtgtttgccacccctgctggatgatgtggtgtca
gagaggttagactcaagtgttttgcgcaacgtaactagtactgaaggatttgctaccatg
gagccttatgtaagtaagcctactgagattcaaatgtctagttcagcacccaaagcatct
atacatgacactggctctgagagtgcacttacagtgaggcatccattgcactctccttcc
atggaggccgccacttcagcggaattcactactttgagtatggaatctagacctactcca
atttcaaatgtatctagcaatgatgatattccatgtgttgcatcacctcctcttcctctg
agtccaagggtgtctagaaaactctctggttttagaagtccaacaaatggttttgagcct
ggtcttgtgcttgatgatagtggtggagatcaagaagttagtgaatattcagttgatagg
caaacggatagcattcatacaaacttttctgatgtcccttccttggatgatgattcaaga
aacaatgaaaacaaggttgcacgggatgatatttcctcttttctcaatcatcctatgaat
ttcaagcacccaactcatctggtaactccatctgagatattgagagctgcttcatccact
gaaactgcccttgttgcagaacagaagactaaggaagagccaaacattcaagacgtggtt
atcaacagcaatgtgcacaatgtcgaggtggaggttaaggttgtgggtgaaactggattt
agtcagaaaaatgaaattggctctctgcgaaaaactcacaatcttgttccagaaaataaa
gttaaagcattttgctctcaggcctcagatcttggtattgagatggccagagagtgtggt
gcattatcatctgaaatgtatattgcagaggaatctcatcaacttaatggagctaatgta
agtgaggaattaactcaaccttcaaatgccgaggatgaagtccatgacttcacaagggat
atctctagaaagaatgcaaattcagctatgcctgcaacagtttcacagccagtggcgcaa
atcacgaaagcaaaaaagcaaaagggtaagaacactcaaggatcatgtccatcgtcgcca
tccccaagtgctttcaattcagcagattcgtccagtgagccaggtgttagttcaagtatt
ccttctgcggaagctggtttttcacaaattatgatcatgcaggagatgcttaatcagtta
acaactatgcaaaaagaaatgcagaagcagatgtcggtgatggttactgtcctagtcact
aaagaaggtaaaaggctggagactgccctagggaggagcatggaaaaagctgtcaaggcc
aatactgatgcgttatgggctcattttcaggaagagaatgcgaaacaagagaaattagtt
agagagcgtacacagcaaataacaagtttgatcactaactgcataaataaggacttgcca
gctatggtggagaaaacagtgaagaaggaattggctgcagttggaccagctgtagctcgt
gcaatttctccggccattgaaaaaacaatatctacggctattacagaggcttttcagaga
ggagttggtgataaggcagtgaatcaactggagaaatcagttaattcaaaacttgaagct
actgttgctaggcagatccaagcacaatttcaaacttctggcaagcaagctcttcaggat
gcattgaagtctagtttggaagcttccgttattcctgcctttgagatgtcatgcaaagcc
atgtttgagcaagttgatgctaccttccagaaaggaatgattgaacatgcaactgtagct
cagcagcagtttgagtccactcattctccactggcacttgctttaagggatgccattaat
tcagcatcatctgtgactcaaactttaagtggggaactggctgatggtcagagaaacttg
gtagctcttgctgttgcaggagcaaattcaaaagccgtaaatcccttggttacccaacta
aacaatggacctttgggtggcctccatgataagattgaggcacctttggatccaaccaaa
gagctatctagattgatatctgaacgtaaatatgaggaagcattcacagcagccctacaa
agaagtgatgttttcattgtatcttggttatgctctcaggttgatttacaggggattttg
tcaatgattcctctcccattgagccaaggagtacttctatcacttctgcagcagttggcc
tgtgatatcagcaaggattcatcccggaagttggtttggatgaccgatgtggcggttgca
ataaacccagctgacccaatgatagcaatgcatgtgcggccaatctttgagcaagtctat
aagatattaaaccatcatcgaagccttcctacaacttccggtactgagatttccagtatc
cgacttgtcatgcacgtcatcaactccatgctgatgacctgtaaatga
DBGET
integrated database retrieval system
